Gene Information

Name : Pjdr2_0101 (Pjdr2_0101)
Accession : YP_003008868.1
Strain : Paenibacillus sp. JDR-2
Genome accession: NC_012914
Putative virulence/resistance : Resistance
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1135
EC number : -
Position : 111356 - 112141 bp
Length : 786 bp
Strand : +
Note : PFAM: ABC transporter; SMART: ATPase AAA; KEGG: yen:YE3253 DL-methionine transporter ATP-binding subunit

DNA sequence : 
ATGATCACGTTTAGAGAAGTCAGCAAACGGTACAAAGCCGGCAGGCAGTGGGTAGAAGCGGTCAAGCCCACCTCGCTGCA
TATAGAGAAGGGGCAGATTCAAGGGATGATCGGATTCAGCGGAGCGGGCAAATCAACCCTGCTTCGGATGGCCAATCTGC
TCGAGACGCCAACTTCCGGAGAGGTTTATATAGATGGACAAGAACTTACGAGGCTGAGCGCAGGAGAATTGCGGGAGGCA
AGACGATCGATCGGAATGATTTTTCAGCATTATAACTTGCTGAGCAACGAGACTTGTGCGGCAAATGTCGAATTCGTGCT
AAAAGCAGCAAAGCTGCCTTCCAGAGAGCGGAAGAGAAGAGTAGAGGAATGCCTTGAGATTGTGGGGCTGGCGGATAAAG
CGAGGCAGTATCCGGCTCAACTGAGCGGCGGGCAGAAGCAGCGGGTGGCAATCGCCAGAGCTCTTGCGAACAATCCAAAG
GTACTGCTGTGCGATGAGCCGACTTCGGCGCTTGATCCGGTTACGACATTGTCGATTCTCGAATTTCTGGAGAAGATTAA
CCGCGAGTTCCAGGTGACGATCATGCTGGTGACGCATGAGATTCAGGTGGCCAAGCGGTTATGCAGCCGGATCGCGGTCA
TGGAGAATGGACGGATCACCGAGCAGCTGGATATGATGAACCTTTCCGGAGTTAAGCCGGTAACGCCGCTGGGACAGATT
TTGTTCGATACCGCCGAGGGATCTTCCTCTTCCGTTTGGCAAAGAGGGGAGGGTTACCGTGGATAG

Protein sequence : 
MITFREVSKRYKAGRQWVEAVKPTSLHIEKGQIQGMIGFSGAGKSTLLRMANLLETPTSGEVYIDGQELTRLSAGELREA
RRSIGMIFQHYNLLSNETCAANVEFVLKAAKLPSRERKRRVEECLEIVGLADKARQYPAQLSGGQKQRVAIARALANNPK
VLLCDEPTSALDPVTTLSILEFLEKINREFQVTIMLVTHEIQVAKRLCSRIAVMENGRITEQLDMMNLSGVKPVTPLGQI
LFDTAEGSSSSVWQRGEGYRG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
opuBA NP_938494.1 choline transport system ATP-binding protein Not tested Not named Protein 3e-28 41
opuBA YP_005124363.1 choline transport system ATP-binding protein Not tested Not named Protein 2e-28 41
unnamed ABR13524.1 phosphite import ATP-binding protein Not tested PAGI-7 Protein 8e-27 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Pjdr2_0101 YP_003008868.1 ABC transporter NC_012469.1.7686878. Protein 5e-37 43