|
Name : Pjdr2_0093 (Pjdr2_0093) Accession : YP_003008860.1 Strain : Paenibacillus sp. JDR-2 Genome accession: NC_012914 Putative virulence/resistance : Unknown Product : seryl-tRNA synthetase Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0172 EC number : 6.1.1.11 Position : 105426 - 106709 bp Length : 1284 bp Strand : + Note : KEGG: baa:BA_0607 tRNA synthetase class II core domain (G, H, P, S and T); TIGRFAM: seryl-tRNA synthetase; PFAM: tRNA synthetase class II (G H P and S); Seryl-tRNA synthetase, class IIa-like DNA sequence : GTGTTGGACGTGAAATGGTTACGTAACGAATATGAGCAGGTGGAGAAGGCGCTGAAGAACCGTAGCGCTTCGCTCGACCT TATTTCCGGTTTTCCGGAGCTGGATGTTAAGCGCCGCGCTCTGCTCGTTGAAACAGATAATTTGAAAACTCGCCGCAATA CGGTATCGCAGGAAGTGGCGAAGCTGAAGAAATCCGGCGGCGACGCTGAAGCGCTGATTATCGAAATGCGCGAAGTGGGT GACCGGATTAAAGAACTGGACGAGGAGATTCGCACGGTTGAGGCCCAAGTGGAAGAGCTGATGCTGGCTATCCCGAACCT GCCTCATGAGAGCGTCCCCGTTGGCTCTTCGGAAGAAGATAATGTCGAGATTCGTCGTAATGGCGAGCAAACGACGTTTG ACTTCGAGCCGAAGGCTCACTGGGATCTTGCGCAAGATCTGGGCATCCTGGATTTCGAGCGCGCAGGCAAAGTAACAGGC TCGCGCTTTACCTTCTACCGTGGTCTTGGCGCGCGTCTAGAGCGTGCTCTGATCAGCTTCATGATGGACCTGCACAGCGA CCAGCATGGTTACGAAGAAGTGCTGCCGCCTTACCTTGTTAATCGCGACAGCTTGATCGGTACAGGCCAGCTGCCGAAGT TCGAAGAGGATTTGTTCAAGATCAGCGATTCGGATTACTTCCTTATTCCAACGGCTGAAGTTCCTGTGACGAACCTTCAC CGGGAAGAAATTCTGTCGATTGAAGAGCTGCCGAAGCATTTTGTTGCTTACAGCTCGTGCTTCCGTTCGGAGGCAGGTGC GGCTGGCCGCGATACGCGTGGTCTGATCCGTCAGCATCAGTTCAACAAAGTCGAGCTGATCAAGCTGGCGAAGCCGGAAG AATCTTATGATGAGCTGGAGAAAATGACAGCTAATGCAGAGAAAGTTCTGCAGCTGCTTGGTCTGCCATACCGTGTTCTG GCGCTCTGCACAGGCGATATGGGCTTTACGGCAGCGAAGACTTACGATCTTGAAGTGTGGCTGCCTAGTGCAGGTACGTA CCGCGAGATTTCGTCCTGTTCGAACGTTGAGGACTTCCAGGCTCGCCGCGCAGGCATCCGCTTCCGCCGCGATGCGAAGA GCAAGCCGGAGTTCGTGCATACGCTGAACGGTTCGGGTCTGGCGGTAGGCCGTACGTTTGCAGCTATTCTGGAGAACTAC CAGCAAGCTGACGGAACGATTGTAGTACCGGAAGTTCTTCGCCCGTACATGGGTGGACTGGAAAAAATCAGCCCGCGTGT TTAA Protein sequence : MLDVKWLRNEYEQVEKALKNRSASLDLISGFPELDVKRRALLVETDNLKTRRNTVSQEVAKLKKSGGDAEALIIEMREVG DRIKELDEEIRTVEAQVEELMLAIPNLPHESVPVGSSEEDNVEIRRNGEQTTFDFEPKAHWDLAQDLGILDFERAGKVTG SRFTFYRGLGARLERALISFMMDLHSDQHGYEEVLPPYLVNRDSLIGTGQLPKFEEDLFKISDSDYFLIPTAEVPVTNLH REEILSIEELPKHFVAYSSCFRSEAGAAGRDTRGLIRQHQFNKVELIKLAKPEESYDELEKMTANAEKVLQLLGLPYRVL ALCTGDMGFTAAKTYDLEVWLPSAGTYREISSCSNVEDFQARRAGIRFRRDAKSKPEFVHTLNGSGLAVGRTFAAILENY QQADGTIVVPEVLRPYMGGLEKISPRV |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| serS | YP_003446791.1 | seryl-tRNA synthetase | Not tested | The aminoglycoside resistance gene cluster | Protein | 9e-131 | 62 |
