|
Name : NT05HA_1001 (NT05HA_1001) Accession : YP_003007462.1 Strain : Aggregatibacter aphrophilus NJ8700 Genome accession: NC_012913 Putative virulence/resistance : Unknown Product : integrase, catalytic region Function : - COG functional category : L : Replication, recombination and repair COG ID : COG2801 EC number : - Position : 1023355 - 1024125 bp Length : 771 bp Strand : + Note : identified by Glimmer3; putative DNA sequence : GTGGCTAAAATGCCTCGCTCAACCTTTTATTATCACGCGGTTAAATGCAATTATCATGAGATAAAAGAGGCAATCTTGCT GCTGTATAAAAACAACAGGAAACGAGATGGCTATCGCCCAATGACACTCAAATTACGCCAAATGGGTTTCCATTTGAATC ATAAAACGGTGTTAAGACTGATGAATGAGTTAGGTATTCATTCCATTTTACGTAAGAAAAGACATGGAAAACGCGGAAAA ACATTGCATATTGCCCCGAATGTACTGAATCGTGACTTTACCGCAACGGCGCTCAATCAAAAATGGGTAACTGATGTTAC CGAGTTTCAAGTTGGGCAAGAAAAGCTCTATTTTTCGCCATTGATGGATTTAGCAAATCGAGAAATTATTGCCTATAACT TTGCGACACGCCTCAAGTTTCCTTTTGTAAAAAATATGTTAGAACAAGGGCTTAACCGTCTTAAACCGACAGAATACCCG ATTATTCACAGTGACCAGGGGGTATTGTATGGCACGGTAGAATGGGTGAATATGTTGAAAGGAAAAGCCGTACAGAGCAT GAGTCGTCGAGGAAATTGCTACGATAATGCCGTGATTGAAAGTTTTTTTGCGATATTAAAATCCGAGTGCTTTTACTCAC GCAGTTACACATCTATTGCTGAATTACAGGCAGAGATTGAAGAATATTTGGTGTATTACAACCAAAAACGAATTAAACTT GATTTAAAAGGATTGAGCCCGGTGCAATACCGAGCTCAATATTTAAGTTAA Protein sequence : MAKMPRSTFYYHAVKCNYHEIKEAILLLYKNNRKRDGYRPMTLKLRQMGFHLNHKTVLRLMNELGIHSILRKKRHGKRGK TLHIAPNVLNRDFTATALNQKWVTDVTEFQVGQEKLYFSPLMDLANREIIAYNFATRLKFPFVKNMLEQGLNRLKPTEYP IIHSDQGVLYGTVEWVNMLKGKAVQSMSRRGNCYDNAVIESFFAILKSECFYSRSYTSIAELQAEIEEYLVYYNQKRIKL DLKGLSPVQYRAQYLS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| APECO1_1088 | YP_853108.1 | transposase subunit | Not tested | PAI IV APEC-O1 | Protein | 4e-55 | 49 |
| EFAU085_00737 | YP_008394261.1 | ISEnfa3, transposase | Not tested | Not named | Protein | 1e-47 | 45 |
| SEQ_1760 | YP_002746996.1 | transposase | Not tested | ¥ÕSeq3 | Protein | 1e-35 | 42 |
| SEQ_0791 | YP_002746129.1 | transposase | Not tested | ¥ÕSeq2 | Protein | 1e-35 | 41 |
| CDBH8_0905 | YP_005159997.1 | transposase-like protein | Not tested | Not named | Protein | 3e-41 | 41 |
| CDCE8392_1982 | YP_005134513.1 | transposase-like protein | Not tested | Not named | Protein | 5e-42 | 41 |
