Gene Information

Name : NT05HA_0860 (NT05HA_0860)
Accession : YP_003007332.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Unknown
Product : trehalose-6-phosphate hydrolase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0366
EC number : -
Position : 873918 - 875543 bp
Length : 1626 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence :
ATGAACAATTCTCAATGGTGGAAAAACGGCGTTATCTACCAAATCTATCCGAAATCCTTCCAAGACACCACAGGCAGCGG
AACAGGCGATATTCAAGGCATTATCAAGCGCTTGGATTATTTACAAACCTTAGGCATTGATGCTATTTGGATTACGCCTA
TGTATGTGTCGCCACAAATTGATAACGGCTATGACATTGCCGATTACCGCAATATTGATCCAAGTTACGGCACTATGGCT
GATTTTGAACAGCTGGTTGTCGAAGCTCATAAGCGCAATATTCGTATTGTAATGGACATGGTGTTTAACCACAGTTCCAC
TTTCCACGAATGGTTTCAAAAAGGCGAAGATCCATCCTCCGAATATCATGATTACTACATTTGGCGCGAACAACCCACCA
ACTGGAAATCTAAATTCGGTGGTTCTGCGTGGAAATGGTCGGACAAAGCACAGCAATATTATTTGCATCTATTTGCAACA
GAACAGGCGGACTTAAACTGGGAGAATCCTAAAGTGCGGTCGGAATTATTTGCGATTTGCAAATTTTGGGCGGAAAAGGG
CATTGATGGCCTGCGTTTAGATGTAGTGAATTTAATTTCCAAACCGGAGGTATTTGAAGACGATTATGAAGGAGACGGTC
GCCGTTTCTATACTGATGGGCCAAAAATTCACAAATACTTACAAATGCTTAACCAAAACGCTTTAACGCCTTACGGCTTG
ATGTCGGTGGGCGAAATGTCTTCTACACAATTAGAACACTGTCAGCAGTATGCCAATTTAGACGGCACCGAACTTTCCAT
GACCTTCAATTTTCATCACTTGAAAGTGGATTATCCGAATGGCGAAAAATGGACCCACGCAAAACCCGATTATGTGGCGC
TGAAATCTATTTTCAATTATTGGCAGCGGGGAATGCATGGACGTGCTTGGAATGCGCTGTTCTGGTGTAATCACGATCAA
CCGCGCATTGTTTCCCGTTTCGGTGATGAAGGAGAGTTGCGTCAAACCTCGGCGAAAATGCTTGCTATGCTGCTACACGG
AATGCAAGGCACGCCGTATATTTATCAAGGCGAAGAAATCGGCATGACTAATCCGAATTTTACCTCTATTAAAGACTATC
GCGATGTGGAAAGCCTAAACGCTTACCAAGAATTGAAAGATAAATACTTGTCTGAGACAGAAATTCTGAAAATTTTGGCA
CAAAAATCCCGCGATAACGCTCGCACGCCGGTTCAGTGGGACGCTTCCGTAAATGCCGGTTTCTCGGACGGCAAACCATG
GATTGACGTGGCGCAAAATTATCATAAAATTAATGCTGAACAGGCCCTACAAGATAAAAAATCCGTGTTCTACACTTACC
AACGGTTAATTAAATTACGCAAAGAATTGCCGGTGTTCACTGATGGCGACTATCGTGATTTATTGCCGGAACATCCTTGG
GTTTGGGCATATCAACGCTATGTTGATGGCAAAACATTGACTGTGCTTGCCAATTTAAGCGATGAATTGCAATCAATTAC
ATTAAATGTGAAAGGCGAAGAGTTAATGAATAATTATGTAGATTTGGAACGCAATACCGAAGAAATCGCCTTACAACCCT
ACCAAGGTGTTTATTTATTATCCTAA

Protein sequence :
MNNSQWWKNGVIYQIYPKSFQDTTGSGTGDIQGIIKRLDYLQTLGIDAIWITPMYVSPQIDNGYDIADYRNIDPSYGTMA
DFEQLVVEAHKRNIRIVMDMVFNHSSTFHEWFQKGEDPSSEYHDYYIWREQPTNWKSKFGGSAWKWSDKAQQYYLHLFAT
EQADLNWENPKVRSELFAICKFWAEKGIDGLRLDVVNLISKPEVFEDDYEGDGRRFYTDGPKIHKYLQMLNQNALTPYGL
MSVGEMSSTQLEHCQQYANLDGTELSMTFNFHHLKVDYPNGEKWTHAKPDYVALKSIFNYWQRGMHGRAWNALFWCNHDQ
PRIVSRFGDEGELRQTSAKMLAMLLHGMQGTPYIYQGEEIGMTNPNFTSIKDYRDVESLNAYQELKDKYLSETEILKILA
QKSRDNARTPVQWDASVNAGFSDGKPWIDVAQNYHKINAEQALQDKKSVFYTYQRLIKLRKELPVFTDGDYRDLLPEHPW
VWAYQRYVDGKTLTVLANLSDELQSITLNVKGEELMNNYVDLERNTEEIALQPYQGVYLLS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
malL YP_251987.1 oligosaccharide alpha-1,6-glucosidase Not tested SCCmec Protein 9e-121 44