Gene Information

Name : NT05HA_0567 (NT05HA_0567)
Accession : YP_003007067.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Resistance
Product : macrolide export ATP-binding/permease MacB
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 569373 - 570056 bp
Length : 684 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence :
ATGGCTAAACCAGTCATTGAAACACAGCATTTATATAAAAGATTCGGCCAAGTGACCGCACTTGAAGACATTAATATTCA
AATTGCCGAAGGCGAATTCGTCTCTATCATGGGTGCCTCCGGTTCAGGTAAAACCACATTAATGAATATTCTCACCGGCT
TGGATACCGCGACAGAAGGCAAAGTGATTTTAGACGGAGTGGACGCAGCACAACTGGACGAAACGGGCAGACAACGTTTC
CGCGCGGAAAAAATCGGCTTGGTGTTCCAACAATTTCACCTCATCCCCTATTTAACCGCGCTTGAAAACGTAATGCTGGC
GCAACATTATCACAGCGTGGTAGATGAAGCCGCCGCCAAAGCAGTATTAGATCAAGTGGGCTTAGCACATCGCATGAATC
ACCGCCCAAGCCAACTTTCCGGCGGGGAACAACAACGGGTGTGTATTGCACGCGCCTTAGTGAATCAGCCGCCGGTCATT
TTTGCCGACGAACCGACCGGCAACCTCGATGAAACAAATGAAAATTTAGTGTTAAATTTACTCACGGAATTAAACCGGCA
GGGTCGCACTATCGTCATGGTGACTCATAACCCGGATTTAGGTAAACTCACCAACCGCATTATTTACTTGCAACACGGCA
AACTATTGCGCGAGGAAAAAAACAATGAAACCCCAACGGCTTAA

Protein sequence :
MAKPVIETQHLYKRFGQVTALEDINIQIAEGEFVSIMGASGSGKTTLMNILTGLDTATEGKVILDGVDAAQLDETGRQRF
RAEKIGLVFQQFHLIPYLTALENVMLAQHYHSVVDEAAAKAVLDQVGLAHRMNHRPSQLSGGEQQRVCIARALVNQPPVI
FADEPTGNLDETNENLVLNLLTELNRQGRTIVMVTHNPDLGKLTNRIIYLQHGKLLREEKNNETPTA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 3e-24 41
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 7e-26 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 7e-26 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT05HA_0567 YP_003007067.1 macrolide export ATP-binding/permease MacB NC_012469.1.7686878. Protein 2e-36 45
NT05HA_0567 YP_003007067.1 macrolide export ATP-binding/permease MacB NC_012469.1.7685735. Protein 3e-34 45
NT05HA_0567 YP_003007067.1 macrolide export ATP-binding/permease MacB CP001581.1.gene798.p Protein 4e-29 43
NT05HA_0567 YP_003007067.1 macrolide export ATP-binding/permease MacB NC_008702.1.4606598. Protein 4e-29 43