Gene Information

Name : NT05HA_0450 (NT05HA_0450)
Accession : YP_003006952.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Virulence
Product : transcriptional regulatory protein QseB
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 460640 - 461311 bp
Length : 672 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence : 
ATGCGTATTTTATTAATTGAAGACGATCCGTTAATCGGTAATGGGATTCAAATAGGCTTAACCAAATCGGGCTTTGCGGT
GGATTGGTTTACTGACGGTAAAATTGGCTTGGAAGCCGCCCAATCGGCACCTTATGATGCTGTCGTATTAGATTTGACGT
TGCCGAAAATGGATGGTTTAGATGTATTGCAAGCTTGGCGCCAGAAAGGAATTGATGTGCCGGTCTTGATTCTTACTGCA
CGGGATACTGTCGATGAACGCATTACAGGATTACAACGTGGCGCGGATGATTATTTATGTAAACCTTTTGCTTTAGCAGA
AGTGGTAGCGCGCTTGCATGCGTTGATTCGACGTCGTTACGGCCATGCCAATCCTGTAATTCAACATAGTTTGGTACGTT
TTGAACCAAATCAACGCAAGGTATTTTTGTGTGATCAGGAAATTTCTCTTACTACTCGGGAGTATAAGTTGCTCGAACTG
TTTATGTTGAATAAAGAGCGTGTACTTAGCCGCAATTTTATTGAGGAAAAACTTTATACTTGGGATAACGAAGTGAGTAG
TAATGCGTTGGAAGTACATATTTATAATTTACGCCAAAAACTCGGTAAACAATTTATCCGAACCGTACATGGTGTGGGCT
ATGCTTTAGGAAAAAATGATGAAGAGGATTAA

Protein sequence : 
MRILLIEDDPLIGNGIQIGLTKSGFAVDWFTDGKIGLEAAQSAPYDAVVLDLTLPKMDGLDVLQAWRQKGIDVPVLILTA
RDTVDERITGLQRGADDYLCKPFALAEVVARLHALIRRRYGHANPVIQHSLVRFEPNQRKVFLCDQEISLTTREYKLLEL
FMLNKERVLSRNFIEEKLYTWDNEVSSNALEVHIYNLRQKLGKQFIRTVHGVGYALGKNDEED

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 9e-40 46

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT05HA_0450 YP_003006952.1 transcriptional regulatory protein QseB BAC0487 Protein 2e-40 45
NT05HA_0450 YP_003006952.1 transcriptional regulatory protein QseB BAC0638 Protein 9e-32 43

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT05HA_0450 YP_003006952.1 transcriptional regulatory protein QseB VFG0473 Protein 9e-40 44
NT05HA_0450 YP_003006952.1 transcriptional regulatory protein QseB VFG1390 Protein 3e-32 42