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Name : potB (NT05HA_0425) Accession : YP_003006933.1 Strain : Aggregatibacter aphrophilus NJ8700 Genome accession: NC_012913 Putative virulence/resistance : Unknown Product : spermidine/putrescine ABC transporter membrane protein Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG1176 EC number : - Position : 430939 - 431811 bp Length : 873 bp Strand : - Note : can transport spermidine and putrescine but affinity is higher for spermidine; forms a complex of PotA2BCD; PotB is a membrane component DNA sequence : TTGTACTCAACGATGAAGATAATCAATAATAAATTTCAGAAAATTACTGTTGCGATTATCTTCAGTTGGCTCATCTTCTT TGTACTAATTCCCAACTTATTGGTATTAGTCGTAAGTTTCTTAACTAGAGATAGTAGCAACTTCTACGCTTTGCCATTTA ACTTTGATAACTACATCAACCTGTTTAATCCGCTTTATGCGCAGGTAGTGTGGAACTCATTGTATATGTCGGGCATTGCC ACCATTATTTGCTTACTGATCGGCTATCCGTTCGCCTTTATGGTCAGTAAAATTCACCCGAAATATCGACCGCTCTTGTT ATTCCTTGTGGTATTGCCATTCTGGACTAACTCCCTTATTCGTATTTATGGTATGAAAATATTCCTTGGTGTAAAAGGTG TGTTGAATACCATGTTGATGGATATGGGAATTTTGAGCGAACCAATTCGAATTCTGAATACAGAAGTTGCAGTTATCATC GGTTTAGTGTATTTGCTGTTACCATTTATGATTCTGCCGCTCTACTCCGCTATCGAAAAACTTGATGGTCGTTTATTAGA AGCTGCAAAAGACTTGGGAGCCAATGCTGTCCAGCGTTTCTTCCGCGTGATTCTGCCATTAACTATGCCGGGTATCATTG CCGGTTGCTTGTTAGTATTGTTACCTGCAATGGGTATGTTCTATGTGGCTGACTTACTCGGTGGAGCAAAAGTGTTGTTA GTGGGTAACGTGATTAAGAGCGAGTTCTTAATTTCCCGTAACTGGCCATTTGGTTCGGCAATCAGTATCGGTTTAACCAT TTTAATGGCATTGTTAATTTTCGTTTATTATCGTGCAAATAAATTGCTGAACAAAAAAGTGGAGTTGGAATAA Protein sequence : MYSTMKIINNKFQKITVAIIFSWLIFFVLIPNLLVLVVSFLTRDSSNFYALPFNFDNYINLFNPLYAQVVWNSLYMSGIA TIICLLIGYPFAFMVSKIHPKYRPLLLFLVVLPFWTNSLIRIYGMKIFLGVKGVLNTMLMDMGILSEPIRILNTEVAVII GLVYLLLPFMILPLYSAIEKLDGRLLEAAKDLGANAVQRFFRVILPLTMPGIIAGCLLVLLPAMGMFYVADLLGGAKVLL VGNVIKSEFLISRNWPFGSAISIGLTILMALLIFVYYRANKLLNKKVELE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| potB | BAA36746.1 | - | Not tested | LIM | Protein | 1e-74 | 62 |
