Gene Information

Name : NT05HA_0397 (NT05HA_0397)
Accession : YP_003006909.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Virulence
Product : AfeA
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 404880 - 405761 bp
Length : 882 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence : 
ATGCGTTTACTCGCAACCCTCATCAGCGTACTGGCATTAAGTTTAAGTAGTAGCTTGGCTTATGCAAAATTCAAAGTTGT
TACCACCTTCACCATCATTCAAGACATGGCGCAAAATATCGCCGGTGATGCCGCTACCGTAGAGTCCATCACCAAGCCCG
GAGCGGAAATTCATGATTATGAACCGACACCGAAAGATATTGTGAAAGCCCAATCTGCCGATTTAGTATTATGGAACGGT
TTAAATCTTGAACGTTGGTTTGAAAAATTCTTCCAAAACGTGAAAGATAAACCGGCTGTTGTTGTGACTGAAGGTATTGA
ACCAATGTCTATTCATGAAGGTCCTTATACCGGCAACCCGAATCCGCACGCTTGGATGTCTCCTTCCAATGCATTGATTT
ACATTGAAAACATTAAAAATGCGTTGGTCAAATACGATCCGCAAAATAAAGAAACGTACGAAAAAAACGCCGCACTTTAT
GCACAAAAAATCAAAGAGTTGGATAAACCGTTACGTGAAAAATTAGCTCAAGTGCCGGAAGCCCAACGTTGGCTGGTTAC
CAGTGAAGGCGCATTTAGCTATCTCACCCGCGACTACGGTTTTAAAGAAGCCTACTTATGGCCGATTAATGCCGAACAGC
AAGGTACGCCACAACAGGTTCGTAAAGTCATTGAAACCGTAAAAGCCCACAATATTCCGGTAGTTTTCAGTGAAAGTACC
ATTTCACCAAAACCGGCAAAACAAGTGGCGAAAGAAACCGGCGCGAAATACGGTGGCGTGCTTTATGTTGATTCGCTTTC
CAATAAAAAGGGCCCTGTACCGACTTATGTCGATTTGTTAAATACCACCGTTTCCACTATTGCAAAAGGATTTGAAAAAT
AA

Protein sequence : 
MRLLATLISVLALSLSSSLAYAKFKVVTTFTIIQDMAQNIAGDAATVESITKPGAEIHDYEPTPKDIVKAQSADLVLWNG
LNLERWFEKFFQNVKDKPAVVVTEGIEPMSIHEGPYTGNPNPHAWMSPSNALIYIENIKNALVKYDPQNKETYEKNAALY
AQKIKELDKPLREKLAQVPEAQRWLVTSEGAFSYLTRDYGFKEAYLWPINAEQQGTPQQVRKVIETVKAHNIPVVFSEST
ISPKPAKQVAKETGAKYGGVLYVDSLSNKKGPVPTYVDLLNTTVSTIAKGFEK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-92 66
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 9e-93 66
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 9e-93 66
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 9e-93 66
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 7e-93 66

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT05HA_0397 YP_003006909.1 AfeA BAC0439 Protein 2e-104 77
NT05HA_0397 YP_003006909.1 AfeA BAC0349 Protein 4e-93 66

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT05HA_0397 YP_003006909.1 AfeA VFG0525 Protein 4e-93 66