Gene Information

Name : NT05HA_0394 (NT05HA_0394)
Accession : YP_003006906.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Virulence
Product : acylphosphatase
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 402288 - 403136 bp
Length : 849 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence :
ATGACCGCCATTTATCAGTGGTTCACCGAGCCTTTCGCCTATCCGTTTATGCAAAACGCATTAATCACAGCGTTATTAGT
CTCCATTATTTGCGCCATGCTATCTTGCTATTTAGTGTTGAAAGGCTGGTCGTTGATGGGAGATGCGATTTCTCATGCCG
TTCTACCGGGCATTTTGGTGGCCTTCTGGTTAAGTTTGCCTTTAGCTCTCGGCGCTTTTGTCGCGGGATTGCTCTGTTCT
GTCTGCGTGGGATATTTAAAAGAAAATAGCCGCATCAAAGAAGATACCGCCATGGGTATTGTCTTTTCAGGGATGTTTGC
GCTCGGGATTGTATTGTTTACCAAAATTGAAACGGATCAACATTTAACCCATATCTTATTTGGTAACTTGCTTGGCGTGA
GCGATGCAGAAATGCTTCAAACACTGGTCATAAGTGCGGTCATTTTTCTGGTTGTTTTTTTGCGTCGAAAAGATTTTTTA
CTTTATTGTTTTGATGCTACGCAAGCCAAAATCGTTGGTCTATCACCTCGACTCTTGCATTACAGCTTACTGATCCTCCT
CGCCTTAACCATCGTCAGTGCAATGCAAGTTGTTGGGGTTATTTTAGTCGTTGCTATGTTAATTTCACCGGGCATTACGG
CATTTATTTTAACCAAACGGTTTGATTATATGATTGCCATTGCGTTGGTGACCTCAATCAGCACCAGCATTTTAGGCACG
ATTGTCAGTTATCACATTGACGGCGCAACCGGCCCTTGTATTATTTTGCTCCAAGCAGCAGTATTCTTAATTGCGCTTGT
GTATAGCAAAATAAAACTCAGATTTAATGTAGCACCTGAAACTCGGTAA

Protein sequence :
MTAIYQWFTEPFAYPFMQNALITALLVSIICAMLSCYLVLKGWSLMGDAISHAVLPGILVAFWLSLPLALGAFVAGLLCS
VCVGYLKENSRIKEDTAMGIVFSGMFALGIVLFTKIETDQHLTHILFGNLLGVSDAEMLQTLVISAVIFLVVFLRRKDFL
LYCFDATQAKIVGLSPRLLHYSLLILLALTIVSAMQVVGVILVVAMLISPGITAFILTKRFDYMIAIALVTSISTSILGT
IVSYHIDGATGPCIILLQAAVFLIALVYSKIKLRFNVAPETR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 9e-56 50
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 8e-56 50
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 8e-56 50
sitD NP_461785.1 permease Virulence SPI-1 Protein 4e-56 50
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 3e-56 50
EF0576 NP_814341.1 cation ABC transporter permease Not tested Not named Protein 1e-36 41
ef0094 AAM75297.1 EF0094 Not tested Not named Protein 9e-37 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT05HA_0394 YP_003006906.1 acylphosphatase BAC0442 Protein 5e-80 63
NT05HA_0394 YP_003006906.1 acylphosphatase BAC0352 Protein 2e-56 50
NT05HA_0394 YP_003006906.1 acylphosphatase BAC0441 Protein 2e-39 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT05HA_0394 YP_003006906.1 acylphosphatase VFG0528 Protein 2e-56 50