Gene Information

Name : NT05HA_2207 (NT05HA_2207)
Accession : YP_003008602.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Resistance
Product : SoxR protein
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 2162229 - 2162645 bp
Length : 417 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence : 
ATGAAAATAGGGAAGTTAGCTGACGCAGTAGGCTGTAGCGTAGAAGCCATTCGGTTTTACGAGCAAAAAGGACTGATGCC
TCGACCGTCACGTTCCCTTGGGGGCTTTCGCTTATATAACGACGACCACTTGCAACGCTTGTCTTTCATTTGTTATTGCC
GATCGTTGGATATGTCCCTTGAGGAAATTAAATTACTGTTAAGTTTGGAAAGTGCGGGCGTTCAACAAAAAATCGAAATT
AATGCTCTTATTGATCGTCATATTCAAGATATCGCCAAGCGAATCCACCATTTACAGCATTTGCGCATGAATCTGTTACA
ATTGAAACAGCAATGCGGTGAAATCAACCCGCAACAAAGTTTGTTCCAGATTTTACAACGTAGCCATGCCAAATTCAGAC
CGATAAAAACGTCATAA

Protein sequence : 
MKIGKLADAVGCSVEAIRFYEQKGLMPRPSRSLGGFRLYNDDHLQRLSFICYCRSLDMSLEEIKLLLSLESAGVQQKIEI
NALIDRHIQDIAKRIHHLQHLRMNLLQLKQQCGEINPQQSLFQILQRSHAKFRPIKTS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
cadR ADZ05769.1 MerR family transcriptional regulator Not tested AbaR11 Protein 9e-18 43
cadR ACS32041.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-17 43
ACICU_00234 YP_001844893.1 transcriptional regulator Not tested AbaR20 Protein 1e-17 43
pbrR CAJ77094.1 Transcriptional regulator Not tested AbaR1 Protein 8e-18 43
cadR AGK36653.1 MerR family transcriptional regulator Not tested AbaR26 Protein 8e-18 43
pbrR CAJ77021.1 transcription regulator Not tested AbaR1 Protein 8e-18 43
cadR ACN81029.1 MerR family transcriptional regulator Not tested AbaR5 Protein 1e-17 43
ORF C98 AAN62191.1 putative transcriptional regulator Not tested PAGI-2(C) Protein 4e-17 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT05HA_2207 YP_003008602.1 SoxR protein BAC0058 Protein 5e-21 44