Gene Information

Name : NT05HA_2160 (NT05HA_2160)
Accession : YP_003008555.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Unknown
Product : C4-dicarboxylate anaerobic carrier DcuC
Function : -
COG functional category : S : Function unknown
COG ID : COG1288
EC number : -
Position : 2130032 - 2131561 bp
Length : 1530 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence :
ATGGAAGCGTCTAATCAAAAAAAGACTTTTAATTTCCCATCAGCGTTTACTATTTTATTCTTTATTTTAATCCTTGCTGT
GGGATTAACATGGGTCATCCCATCAGGTTCATATTCTAAATTGACTTATAATATGACCGACAAAGTATTTGTGGTAAAAA
CCTACGGCGAGCAAGACAAAACTTATCCGGCCACTCAAGAAACTCTCAATAATCTCAATATCAAAATTAAACTGACGAAT
TTTACCGAGGGAGTAATCAAAAAACCTATTGCTATTCCTGGCACTTATCAACGTATTGAACAACATTACAAAGGTATCAA
AGATATTCCTATCAGCATGGTGGAAGGAACCATAGAAGCCGTGGATGTGATGGTGTTCATTTTCGTGCTAGGCGGTATGA
TTGGTGTCATTAACAGAACGGGCTCGTTTAACGCGGGGTTAATGGCTTTAGCGCGGCGCACGAAAGGCAATGAATTTATG
ATTGTATTCAGTGTTTCCGTGTTGATGGTGTTAGGGGGTACTACTTGTGGTATCGAAGAAGAAGCAGTTGCATTTTACCC
TATTCTAGTGCCGGTATTTTTAGCCCTGGGGTATGATGCCATTATTTGTGTTGGGGCCATCTTCTTGGCTTCCTCCATGG
GAACAGCGTTTTCCACAATTAACCCATTCTCTGTGGTTATAGCTTCCAATGCTGCCGGTATTCAATTTACCGAAGGGATT
GGGTTCCGTGCCATTGGGTTAGTATTAGGGGCAACTTGCGTTATTGCTTATTTATATTGGTATGCTAAGAAAGTGAAAGC
GGATCCGAGTTTTTCCTATACTTATGAGGATAGAGAAGAGTTTTATCATCGTTATATGAAAAACTTTGATCCAAATACGG
TACTTGAGTTTACCTTAAGAAGAAAACTGATCTTAATTCTCTTCTGTATTGCCTTCCCAATCATGATTTGGGGGGTAATG
GCTGGTGGCTGGTGGTTCCCGCAAATGGCGGCCTCATTCTTGTCCATCACCATTATCATCATGTTTATCAGTGGGTTGAA
AGAAAAAGACATTGTGGAATCCTTTACCGAGGGGGCTTCTGAATTAGTTGGCGTATCCTTAATTATTGGTTTGGCACGTG
GTGTTAACTTAGTGCTTGAACAAGGCATGATTTCCGACACCATTTTGGACTATATGTCTAACTTGGTCAGTGGCATGCCG
GGTAGCGTCTTTATTCTCGGTCAATTGGTAGTCTTTATATTCTTAGGTCTTATCGTGCCGTCTTCCTCCGGTTTGGCAGT
GCTTTCCATGCCGATTATGGCTCCGCTTGCCGATGCTGTAGGCATTCCGCGTGATATAGTGGTTTCTGCCTATAACTGGG
GACAATACGCCATGTTATTCTTGGCACCAACAGGTTTGGTATTGGTCACATTACAAATGTTACACATACCATTTAATAAA
TGGGTCAAGTTTGTTATGCCAATGATTGGTTGTTTGTTGGTGATTGGAGCAATCTTATTGGTTATTCAAGTGTCCTTGTA
TAGCGTTTAA

Protein sequence :
MEASNQKKTFNFPSAFTILFFILILAVGLTWVIPSGSYSKLTYNMTDKVFVVKTYGEQDKTYPATQETLNNLNIKIKLTN
FTEGVIKKPIAIPGTYQRIEQHYKGIKDIPISMVEGTIEAVDVMVFIFVLGGMIGVINRTGSFNAGLMALARRTKGNEFM
IVFSVSVLMVLGGTTCGIEEEAVAFYPILVPVFLALGYDAIICVGAIFLASSMGTAFSTINPFSVVIASNAAGIQFTEGI
GFRAIGLVLGATCVIAYLYWYAKKVKADPSFSYTYEDREEFYHRYMKNFDPNTVLEFTLRRKLILILFCIAFPIMIWGVM
AGGWWFPQMAASFLSITIIIMFISGLKEKDIVESFTEGASELVGVSLIIGLARGVNLVLEQGMISDTILDYMSNLVSGMP
GSVFILGQLVVFIFLGLIVPSSSGLAVLSMPIMAPLADAVGIPRDIVVSAYNWGQYAMLFLAPTGLVLVTLQMLHIPFNK
WVKFVMPMIGCLLVIGAILLVIQVSLYSV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAKOR_01092 YP_008491280.1 Arginine/ornithine antiporter Not tested vSa¥ã Protein 7e-139 59
MW1052 NP_645869.1 hypothetical protein Not tested vSa¥ã Protein 5e-139 59
SAV1171 NP_371695.1 hypothetical protein Not tested vSa¥ã Protein 5e-138 58
SA1014 NP_374287.1 hypothetical protein Not tested vSa¥ã Protein 5e-138 58
SACOL1183 YP_186046.1 hypothetical protein Not tested vSa¥ã Protein 1e-138 58
SAUSA300_1064 YP_493762.1 TRAP family protein Not tested vSa¥ã Protein 1e-138 58