|
Name : hslU (NT05HA_2103) Accession : YP_003008502.1 Strain : Aggregatibacter aphrophilus NJ8700 Genome accession: NC_012913 Putative virulence/resistance : Unknown Product : ATP-dependent protease ATP-binding subunit HslU Function : - COG functional category : O : Posttranslational modification, protein turnover, chaperones COG ID : COG1220 EC number : - Position : 2069737 - 2071068 bp Length : 1332 bp Strand : + Note : heat shock protein involved in degradation of misfolded proteins DNA sequence : ATGTCTGAAATGACTCCTCGTGAAATAGTTTCTGAATTAGATCAACATATTATCGGCCAAAGCGACGCCAAGCGCGCAGT GGCGATTGCCCTGAGAAACCGTTGGCGCAGAATGCAATTGCAAGAGCCGATGCGCCATGAAGTGACCCCGAAAAATATTC TCATGATTGGTCCGACTGGTGTAGGGAAAACCGAAATTGCCCGCCGTTTGGCAAAATTAGCCAATGCGCCGTTTATTAAA GTGGAAGCTACCAAATTTACCGAAGTGGGTTATGTGGGCAAAGAAGTGGATTCCATTATTCGTGATTTAACCGACAGCGC CATGAAGTTGGTACGCCAACGTGAAATCGTGAAAAACCGTACCAAAGCGGAAGAAGCGGCAGAAGAGCGAATTTTAGATG CTTTATTGCCGGCGGCGAAGAATCAATGGGGTGAAACAGAAAGCCGTGATAGCCAAAGTAACACACGTCAAATTTTCCGC AAGAAATTGCGTGAAGGCCAGCTAGACGATAAAGAAGTGGAAATTGATGTGGCAGGCGTGCCGATGGGCGTAGAAATTAT GGCGCCTCCGGGCATGGAAGATATGACCAGTCAGTTGCAATCTATGTTCCAAAATCTGTCTAGTGGGCAAACCAAAAAGC GCAAAATGAAAATCAAAGAAGCGTTGAAAACCTTAATTGACGATGAAGCGGCGAAATTGGTAACTCCGGAAGAGTTGAAA CAAAAAGCCATTGATGCCGTGGAACAAAACGGCATTGTGTTTATCGACGAAATCGACAAAATTTGTAAGAAAGGCGAATA CAGCGGCGCGGATGTCTCCCGTGAGGGTGTGCAACGCGACTTATTACCATTGGTGGAAGGCTCAACCGTCAACACCAAAC ACGGTATGGTAAAAACCGATCACATCTTGTTTATCGCTTCCGGTGCGTTCCAAGTGGCACGTCCGTCGGATTTAATTCCG GAATTACAAGGTCGTTTGCCGATTCGTGTGGAATTGTCTGCGCTGACGGCTGAAGATTTCGAGCGTATTCTAACTGAGCC GAACGCTTCTTTGACCGAGCAATACAAAGCCTTAATGGCTACAGAAGGCGTGAATATTGAATTCACTCAAGACGCTATTA AGAAAATCGCCGAAGCGGCATTTCGTGTAAACGAAAAAACCGAAAACATCGGAGCCCGCCGTTTGCACACGGTGATGGAG CGTTTAATGGATAAAATTTCCTTCAACGCCAGTGACATGGATGGGCAAACCGTTAACATTGATGCTGCTTATGTAAGTGA GGCATTAGGTGATGTGGTTGAAAATGAAGATTTGAGTCGCTTTATTCTTTAA Protein sequence : MSEMTPREIVSELDQHIIGQSDAKRAVAIALRNRWRRMQLQEPMRHEVTPKNILMIGPTGVGKTEIARRLAKLANAPFIK VEATKFTEVGYVGKEVDSIIRDLTDSAMKLVRQREIVKNRTKAEEAAEERILDALLPAAKNQWGETESRDSQSNTRQIFR KKLREGQLDDKEVEIDVAGVPMGVEIMAPPGMEDMTSQLQSMFQNLSSGQTKKRKMKIKEALKTLIDDEAAKLVTPEELK QKAIDAVEQNGIVFIDEIDKICKKGEYSGADVSREGVQRDLLPLVEGSTVNTKHGMVKTDHILFIASGAFQVARPSDLIP ELQGRLPIRVELSALTAEDFERILTEPNASLTEQYKALMATEGVNIEFTQDAIKKIAEAAFRVNEKTENIGARRLHTVME RLMDKISFNASDMDGQTVNIDAAYVSEALGDVVENEDLSRFIL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hslU | YP_003728753.1 | heat shock protein HslU | Not tested | cag PAI | Protein | 1e-99 | 48 |
