|
Name : NT05HA_1845 (NT05HA_1845) Accession : YP_003008259.1 Strain : Aggregatibacter aphrophilus NJ8700 Genome accession: NC_012913 Putative virulence/resistance : Virulence Product : DNA mismatch repair protein MutS Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0249 EC number : - Position : 1828537 - 1831137 bp Length : 2601 bp Strand : - Note : This protein performs the mismatch recognition step during the DNA repair process DNA sequence : ATGATGTCAAAAGAGAATTTCGAACAGCATACACCAATGATGAAACAATATCTGCAACTCAAAGCGGAGAATCCGGATAT TTTGTTGTTTTATCGCATGGGCGATTTTTACGAGCTGTTTTATGACGATGCGAAACGTGCCTCCGCACTGTTAGATATTT CGCTGACCAAACGCGGACAGTCTGCAGGACAGCCGATTCCCATGGCAGGCGTGCCTTATCACGCGGTGGAAGGCTATTTA GCGAAGTTGGTGCAGTTAGGGGAGTCCGTCGCCATTTGCGAACAAATCGGCGATCCGAATACGGCGAAAGGCCCCGTTGA ACGCCAAATTGTGCGCATTGTCACGCCGGGCACGGTGAGTGATGAAGCGCTGTTACCGGAACGGCAAGACAACCTCATTG CCGCGGTGTATCAGGAAAAAGATCATTTCGGTTTGGCGACATTAGACATGACGTCCGGTCGTTTTCAGCTATCCGAACCG CAATCCAAAGCGGATTTGCAAACGGAATTACAACGCATCGCGCCGGTAGAATTGCTTTATTATGAGGATTTCGCTGATTT TCAGCTAATCGAACACGCTAAAGGTTTGCGTCGTCGCCCTATTTGGGAATTCGAGCTAAAAACCGCAATTCAACAGCTTT GCCATCAATTTAATACCAAAGACTTGTGTGGATTTGGTGTGGAAAAAGCGATTCTTGGCTTATGTGCGGCCGGTTGTTTA TTGCAATACGCACGCGAAACGCAACGTACCGCCTTGCCGCATATTCAAAGCATTCATCTCATTCAACACAGCGAAAATAT TCAGTTGGACGCCGCAACCCGTCGCAATTTGGAGCTCACTCAAAATCTGGCGGGTGGTACGGAAAACACGTTGGCGGCTG TGTTGGATAAATGCGTCACCCCAATGGGCAGTCGCTTGCTCAAACGCTGGATTCACCAACCGATTTGCGATGTAGCAAAA CTCACGCAACGCCAACAAGCTATTGGGGCGATTTTAGAACAGGATTTAGTGGCGGATTTGCAACCTTATTTACAACAAGT GGGTGACATGGAGCGCATTTTGGCACGCGTGGCATTACGCACCGCCCGTCCGCGTGATTTAACCCGCTTGCGTACCGCTT TAGAGCAGATTCCTTATATAAAAAATCGGTTGGCTGAAAAAACGTCCGCCAAAATGACCGCACTTTACCAACAATTGGGC GATTTTTCCGCACAATTTGACCTGTTACAACGAGCGATTATTGACAGCCCACCTGTGTTAATTCGTGATGGTGGTGTCAT TGCGGCGGGCTACAACGCCGAATTGGATGAATGGCGTGAATTAGCCGACGGTGCCACCCGTTATTTGGAAGATCTGGAAC AGCGGGAACGGGAAAACACCGGCATTGATACCTTAAAAATAGGTTTCAATGCCGTGCACGGTTATTACATTCAAATTAGC CAGGGGCAAGCCCATAAAGCGCCGATTCATTATGTACGTCGTCAAACCTTAAAAAATGCCGAACGTTATATCATTCCTGA ATTGAAAACCTATGAAGACAAGGTGTTGAAAGCAAAAGGTGCTTCCTTGGCGTTGGAAAAACAGTTATATGATGAAATTT TCGACCAATTATTACCGCACTTGGGTGACTTACAGCTCGCCGGTTTGGCATTAGCCGAATTGGATGTGCTCACCAATTTA GCGGAGCGGGCGGAAAGCCTGAATTATGTGGCACCAACCTTCTCGGCACAAACGGGCATTCATATTCAAAATGGCCGTCA CCCTGTGGTGGAGCAAGTGTTGAAGGAACCGTTTATTGCCAATCCAACAGAACTTACGGAACAGCAACATTTCCTCATTA TCACCGGCCCGAACATGGGCGGTAAAAGTACCTATATGCGCCAAACGGCGCTGATTACCTTAATGGCGTACATGGGCAGT TTTGTACCGGCAGACAGTGCAGTCATTGGCCCTATTGATCGTATTTTTACCCGTATCGGTGCTTCTGATGATCTTGCTTC AGGGCGTTCAACCTTCATGGTGGAAATGACGGAAATGGCCAATATTTTGCACCAAGCGACGGATAAAAGTTTGGTGTTAA TTGATGAAATCGGCCGTGGAACCTCCACTTACGACGGTTTGTCCCTCGCTTGGGCTTGCGCTGAATGGTTAGCGAAGAAA ATCCGTTCTTTAACCTTATTCGCCACCCACTATTTTGAGCTCACCGTGCTACCGGAACAGGTGCAAGGTATCGGCAATAT TCATTTAGATGCCATTGAGCATAATGACACCATTGCTTTCATGCACGCCGTACAAAAAGGCGCTGCCAGTAAAAGCTACG GACTTGCGGTCGCTGCCTTGGCAGGTGTGCCACAACAAGTCATCAAGCTTGCCAAACAAAAACTGGCGCAATTAGAAAAA CTGTCACAGCAAAACGCCAACCAACAGGTACAAAATTTACGCCTGCTCAATCAGCGCCAAGGCGAACTGGAATTTGCCAC GGCAGAAGATGAGAAGAAAGACATGTTGCTCCACATGTTACAAGAGCTGGATCCCGATGACCTCAGCCCAAAACAAGCAC TGGCATATTTATATCAATTGAAGAAAATGGTGAAGGAATAA Protein sequence : MMSKENFEQHTPMMKQYLQLKAENPDILLFYRMGDFYELFYDDAKRASALLDISLTKRGQSAGQPIPMAGVPYHAVEGYL AKLVQLGESVAICEQIGDPNTAKGPVERQIVRIVTPGTVSDEALLPERQDNLIAAVYQEKDHFGLATLDMTSGRFQLSEP QSKADLQTELQRIAPVELLYYEDFADFQLIEHAKGLRRRPIWEFELKTAIQQLCHQFNTKDLCGFGVEKAILGLCAAGCL LQYARETQRTALPHIQSIHLIQHSENIQLDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAK LTQRQQAIGAILEQDLVADLQPYLQQVGDMERILARVALRTARPRDLTRLRTALEQIPYIKNRLAEKTSAKMTALYQQLG DFSAQFDLLQRAIIDSPPVLIRDGGVIAAGYNAELDEWRELADGATRYLEDLEQRERENTGIDTLKIGFNAVHGYYIQIS QGQAHKAPIHYVRRQTLKNAERYIIPELKTYEDKVLKAKGASLALEKQLYDEIFDQLLPHLGDLQLAGLALAELDVLTNL AERAESLNYVAPTFSAQTGIHIQNGRHPVVEQVLKEPFIANPTELTEQQHFLIITGPNMGGKSTYMRQTALITLMAYMGS FVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATDKSLVLIDEIGRGTSTYDGLSLAWACAEWLAKK IRSLTLFATHYFELTVLPEQVQGIGNIHLDAIEHNDTIAFMHAVQKGAASKSYGLAVAALAGVPQQVIKLAKQKLAQLEK LSQQNANQQVQNLRLLNQRQGELEFATAEDEKKDMLLHMLQELDPDDLSPKQALAYLYQLKKMVKE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| mutS | AAA80578.1 | DNA mismatch repair protein | Virulence | SPI-1 | Protein | 0.0 | 65 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| NT05HA_1845 | YP_003008259.1 | DNA mismatch repair protein MutS | VFG0562 | Protein | 0.0 | 69 |
