Gene Information

Name : NT05HA_1760 (NT05HA_1760)
Accession : YP_003008174.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Unknown
Product : ATP-dependent chaperone ClpB
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 1747142 - 1749712 bp
Length : 2571 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence :
ATGAATATTGAAAAATTTACGACCAAATTCCAACAAGCCATTGCTGAAGCGCAATCTTTGGCGATTGGCAAAGATAATCA
ATTTATTGAACCGGTGCATTTATTGAGCGCGTTGTTAAATCAACAAGATGGTTCTGTAGCGCCGATTTTAACCGCAAGTG
GCGTGAACGTTGCCATATTGCGCAACGAACTCAACAACGAACTTGCCAAACTTCCGCAAGTGTCCGGCAATGGCGGTGAT
GTACAACTTTCCCGTCAGTTGCTTAACATCTTGAATTTATGCGACAAATTGGCACAACAACGGCAGGATAAATTTATTTC
CTCCGAACTCTTTTTACTTGCCGCCTTAGAAGAAAAAGGCGCCGTCAGTGAGATACTGAAAAAGTGCGGTGCGAAAAAAG
AACAAATTTTACAAGCCATCGATCATATTCGTGGAGGACAAAACGTGAATGATCAAAACGCGGAAGAAAGCCGCCAAGCC
TTAGAAAAATATACTATCGACTTAACCGCCCGTGCGGAAAGTGGCAAATTGGATCCGGTGATTGGGCGTGATGAAGAAAT
CCGCCGCACCATTCAAGTGTTACAACGCCGCACCAAAAACAACCCGGTGCTTATCGGTGAACCGGGTGTGGGTAAAACCG
CCATTGTAGAAGGGTTGGCGCAACGTATTGTGAACGGCGAAGTACCGGAAGGCTTGAAAAATAAACGCGTGCTTTCACTT
GATATGGGGGCGTTAATCGCTGGGGCAAAGTATCGCGGTGAATTTGAAGAACGCCTGAAAGCCGTATTGAAAGAATTAGC
TCAAGAAGAAGGTCGTGTCATTTTATTTATTGATGAAATTCACACCATGGTCGGTGCGGGTAAAACCGACGGTGCTATGG
ATGCGGGTAACTTGTTAAAACCAAGTTTGGCGCGTGGTGAATTGCATTGTGTGGGCGCGACCACATTAGACGAATACCGC
CAATACATTGAGAAAGATGCGGCACTTGAACGTCGTTTCCAAAAAGTGTTTGTGGGTGAGCCGAGTGTGGAAGACACCAT
CGCCATTTTGCGCGGCTTAAAAGAACGTTATGAAATCCATCACCACGTGCAAATTACCGACCCGGCTATTGTGGCAGCGG
CAACATTGTCTCATCGTTACATTTCCGATCGCCAGTTACCGGATAAAGCCATCGACTTGATCGACGAAGCCGCATCCAGC
ATTCGGATGGAAATCGACTCCAAACCACAGCCGTTGGATCGCTTGGATCGCCGTATTATCCAACTCAAATTGGAACAACA
GGCGTTACAAAAAGAAGATGACGATGCCAGCCGTAAACGCTTGGAGATGTTAGAAAAAGAATTAGCGGAAAAAGAACGGG
AATACGCTGAATTAGAAGAAGTGTGGAAATCTGAAAAAGCCGCGCTTTCGGGTACCCAACACATTAAAGCTGAATTGGAA
AACGCCCGTACCCAAATGGAACAAGCCCGTCGTGCCGGTGATTTGAGCAAAATGTCCGAATTGCAATACGGTAAAATTCC
GGAATTGGAAAAACAATTAGCGGCAGCAGAAGGTGCGGAAGGCAAAGAAATGAGCCTATTACGCTATCGTGTTACCGACG
AGGAAATTGCTGAAGTGCTTTCCCGTGCTACCGGCATTCCGGTCTCCAAAATGATGGAAGGCGAAAAAGAAAAACTCTTG
CGCATGGAAGAAGAATTACACAAACGGGTTATCGGGCAAAACGAAGCCGTGGATGCTGTGGCGAATGCCATTCGTCGTAG
CCGTGCCGGTCTTTCTGATCCGAATCGCCCGATTGGTTCCTTCTTGTTCTTAGGACCAACCGGTGTGGGTAAAACCGAAT
TGTGCAAAACCTTGGCGAAATTCTTGTTTGATAGCGAAGATGCCATGGTGCGTATCGACATGTCCGAATTCATGGAAAAA
CACAGTGTATCCCGCTTGGTCGGTGCACCTCCGGGCTACGTGGGCTATGAAGAAGGCGGTTATTTAACCGAGGCTGTGCG
TCGTCGCCCGTATTCCGTGATTTTGCTCGACGAAGTGGAAAAAGCGCACCACGATGTATTCAACATCTTGTTGCAAGTGT
TGGATGACGGCCGCTTAACCGACGGACAAGGCAGAACTGTGGATTTCCGCAATACGGTGGTAATCATGACGTCTAACTTG
GGTTCCGATTTGATTCAAGGCAACCAAGAAGAAAGCTACGACGAAATGAAAGCGTTAGTGATGTCTGTGGTGAGCCAGCA
TTTCCGTCCGGAATTTATTAACCGAATTGACGAAACCGTGGTGTTCCATCCGTTGAATAAAGACAACATTCGTGCCATTG
CGGAAATTCAGTTAAAACGCTTAATCAACCGCATGGAAAGCCGTGGCTATGTGTTGCACTTTACTGACGACACCCTCAAT
TTCATCAGCGAAATCGGCTATGACCCGATTTACGGCGCACGTCCGTTAAAACGTGCCATTCAACAAGAAATTGAGAACCC
GTTAGCGCAACAAATCCTTTCCGGCAGTTTGTTACCGGAAAAACCGATTACCGTGGATTACGTTGACGGCAAGATTGTGG
CAAAACAATAA

Protein sequence :
MNIEKFTTKFQQAIAEAQSLAIGKDNQFIEPVHLLSALLNQQDGSVAPILTASGVNVAILRNELNNELAKLPQVSGNGGD
VQLSRQLLNILNLCDKLAQQRQDKFISSELFLLAALEEKGAVSEILKKCGAKKEQILQAIDHIRGGQNVNDQNAEESRQA
LEKYTIDLTARAESGKLDPVIGRDEEIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQRIVNGEVPEGLKNKRVLSL
DMGALIAGAKYRGEFEERLKAVLKELAQEEGRVILFIDEIHTMVGAGKTDGAMDAGNLLKPSLARGELHCVGATTLDEYR
QYIEKDAALERRFQKVFVGEPSVEDTIAILRGLKERYEIHHHVQITDPAIVAAATLSHRYISDRQLPDKAIDLIDEAASS
IRMEIDSKPQPLDRLDRRIIQLKLEQQALQKEDDDASRKRLEMLEKELAEKEREYAELEEVWKSEKAALSGTQHIKAELE
NARTQMEQARRAGDLSKMSELQYGKIPELEKQLAAAEGAEGKEMSLLRYRVTDEEIAEVLSRATGIPVSKMMEGEKEKLL
RMEEELHKRVIGQNEAVDAVANAIRRSRAGLSDPNRPIGSFLFLGPTGVGKTELCKTLAKFLFDSEDAMVRIDMSEFMEK
HSVSRLVGAPPGYVGYEEGGYLTEAVRRRPYSVILLDEVEKAHHDVFNILLQVLDDGRLTDGQGRTVDFRNTVVIMTSNL
GSDLIQGNQEESYDEMKALVMSVVSQHFRPEFINRIDETVVFHPLNKDNIRAIAEIQLKRLINRMESRGYVLHFTDDTLN
FISEIGYDPIYGARPLKRAIQQEIENPLAQQILSGSLLPEKPITVDYVDGKIVAKQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
clpC YP_005163377.1 ATP-dependent Clp protease ATP-binding subunit Not tested Not named Protein 3e-153 44