Gene Information

Name : sgbE (NT05HA_1243)
Accession : YP_003007690.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Unknown
Product : L-ribulose-5-phosphate 4-epimerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG0235
EC number : -
Position : 1252904 - 1253599 bp
Length : 696 bp
Strand : -
Note : catalyzes the isomerization of L-ribulose 5-phosphate to D-xylulose 5-phosphate in the anaerobic catabolism of L-ascorbate; links the arabinose metabolic pathway to the pentose phosphate pathway and allows the bacteria to use arabinose as an energy source

DNA sequence :
ATGTTAGAAGAATTGAAGGAAAAAGTGTTAAAAGCTAATTTAGCGTTGCCAAAACACTATTTGGTCAAATTCACTTGGGG
CAACGTGTCTGCTATTGACCGCGAGAGAAATTTGGTAGTCATTAAACCTTCCGGTGTGGAATATGATGTTATGACGGCAG
AAGATATGGTGGTGGTGGATTTATTCAGTGGCAAAGTGGTGGAAGGGACAAAAAAACCGTCCTCCGACACGCCAACGCAC
TTGGAGCTTTACCGTGAATTCCCAACTATCGGTGGTATCGTACACACCCACTCACGCCACGCCACCATTTGGTCGCAAGC
AGGTGAAGATTTAATCGCCGCCGGCACTACCCACGCCGACTATTTCTACGGCTCCATCCCTTGCACCCGCAAAATGACCC
CGGCAGAAATTCAAGGCGAATACGAATTGGAAACTGGCAAAGTTATCGTGGAAACCTTCCGCAAACGTGGCATCGACCCG
AAAGATGTGCCCGCCGTGTTAGTCCATTCCCACGGCCCGTTCGCCTGGGGTACCGACGCCGACAACGCCGTTCATAATGC
GGTAGTACTGGAAGAAATCGGCTACATGAATTTATTCACCCGTCAACTCCGCCCGAATTTGCAACCGATGCAACAAGAAT
TATTGGATAAACATTATCTACGCAAACATGGCAAAAATGCGTATTACGGGCAGTAA

Protein sequence :
MLEELKEKVLKANLALPKHYLVKFTWGNVSAIDRERNLVVIKPSGVEYDVMTAEDMVVVDLFSGKVVEGTKKPSSDTPTH
LELYREFPTIGGIVHTHSRHATIWSQAGEDLIAAGTTHADYFYGSIPCTRKMTPAEIQGEYELETGKVIVETFRKRGIDP
KDVPAVLVHSHGPFAWGTDADNAVHNAVVLEEIGYMNLFTRQLRPNLQPMQQELLDKHYLRKHGKNAYYGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
araD YP_281517.1 L-ribulose-5-phosphate 4-epimerase Not tested Not named Protein 7e-65 59