Gene Information

Name : NT05HA_1102 (NT05HA_1102)
Accession : YP_003007555.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0117
EC number : -
Position : 1114543 - 1115667 bp
Length : 1125 bp
Strand : -
Note : identified by Glimmer3; putative

DNA sequence :
ATGACATCTCAATTTAGCCTAAAAGATGCCGAGTTTATGCAATTGGCGTTAGATTTAGCCAAACAAGGTGAGTTCACTGC
TACACCGAATCCTGCGGTAGGTTGCGTGTTGGTTAAAAATGGTCAAATTATCGGCAAGGGTTTTCATGCCAAAGCGGGAG
AACCCCACGCAGAGGTGATGGCATTGCGTGAGGCAGGTGAGAATGCCCGTGGAGCAACCGCCTATGTCACCCTTGAGCCT
TGTGCCCATTACGGTCGAACCCCGCCTTGTGCTAAAGGTTTGGTGGATGCCGGTGTGCGGATTGTGATTGCCGCGATGTG
TGATCCGAATCCGTTGGTGGCGGGTAAAGGGCTAGGAATTTTAGCCGATGCCGGCATTGAAAGTGCGGTGGGTTTATTAA
AAGAAAATGCCGAGGAACTCAACAAAGGCTTCTTGAAACGTATGCGAACCGGTCGACCTTTTGTGCAATTAAAATTAGCC
ATGAGCATCGATGGCAAAACGGCTATGGCAAATGGTGAAAGTAAGTGGATTACCGGCGCACAGGCGCGAGCAGATGTACA
ACAATATCGCGCGAAAGCCTCGGCAATTTTATCCACATCACAAACCGTGTTGGCAGATAATCCAAGTCTGAATGTGCGGT
GGGCAGAATTACCGCAAGAGGTGCAATCCCGTTATGCCGAGCAGCATTTGCGTCAGCCCGTACGGGTGATTTTGGATTCC
GCCCATAAAGTGCGGTCGGATTTTAATTTGTTTTTAACGGATTCACCTGTTTGGTTGGCAGGCAAGGATAAATTTCAATT
AAATGGTTTTCCTGCGTCCACGGAATATTTACAATTAATCCCTAATCAGGGGGAAAGTCACTTACAGACATTGATGACTG
AATTAGGTAGGCGCCAAATAAATACCCTTTGGGTAGAGGCCGGCGCGACCTTAGCCGGTGCGTTAATCGCAGAAAATTTG
GTGGATGAATTGATTATTTATATGGCACCTAAATTATTAGGCGATCAGGCGCGTGATTTATGTCATTTGCCTAACTTAAC
CAAACTTGCCGATGCCCCATTGTGGGAATTACAATTATGCGAACCTGTCGGCAACGATCTTAAATTAATTTATATAAGAA
AATGA

Protein sequence :
MTSQFSLKDAEFMQLALDLAKQGEFTATPNPAVGCVLVKNGQIIGKGFHAKAGEPHAEVMALREAGENARGATAYVTLEP
CAHYGRTPPCAKGLVDAGVRIVIAAMCDPNPLVAGKGLGILADAGIESAVGLLKENAEELNKGFLKRMRTGRPFVQLKLA
MSIDGKTAMANGESKWITGAQARADVQQYRAKASAILSTSQTVLADNPSLNVRWAELPQEVQSRYAEQHLRQPVRVILDS
AHKVRSDFNLFLTDSPVWLAGKDKFQLNGFPASTEYLQLIPNQGESHLQTLMTELGRRQINTLWVEAGATLAGALIAENL
VDELIIYMAPKLLGDQARDLCHLPNLTKLADAPLWELQLCEPVGNDLKLIYIRK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 7e-65 50
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 7e-65 50