Gene Information

Name : NT05HA_1051 (NT05HA_1051)
Accession : YP_003007507.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Unknown
Product : integrase
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 1063008 - 1063919 bp
Length : 912 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence :
ATGAGTAAAGTTTCATTCGACATTTTATTAGATTCATTTTTTTTCCATCGTCGCCTACGTACAGATACGATAAAGAGTTA
CAAGAAAGCAATGCGACAGCTACAAAAAAATTGCAAGCTTGATTCCCCGGAAGATTTATCAACCACTGATTTATTGCGAT
GGAGAAAAAATGTTTTAGATAAGTCTATTCGCCCTATTACTTGGAATAGTTATATTAGACAGCTAAAAACTATTTTTAAA
TTTGGTATAGAACATAAAATACTTTCCTTCGATAAAAACCCACTTGATGGATTATTTGTTAAAGAAGGACGGCATAGAAA
GAAAGTATATAGTCCAGAACAGTTACGAAAATTAAGCTGCGGAATCAAAGAAAATGCCAACCTTCCTAAAATTATCCGAC
CCACATGGTTTATACAAACACTTATAATGACATTCCGCTGTACAGCAATCCGCAGAGCCCAATTAACCAAATTAAAAATA
CAAGATATTGATCTTGAAAAAAGAATAATTTATATATCCCCAGAAATTAATAAGAATCACGATTATCACACTCTGCCTAT
TTCAGACACATTATATCCTTATTTGGCAAAGCTAATTGATCGGTTACATAAATTTAAACAACCTTCAAATACTCAACTAT
TTAATTTAAATCTTTTCTCTAATGCAGTGAAGCGAAAGGGAAAATCAATGACAGAAGATCAGGTCAGTTATCTGTTTAAA
GTTATATCTAAATATACCGGTGTAATAAGCTCACCTCATAGATTCAGACATACTGCCGCAACAAATTTAATGCGAAATCC
TGAAAATTTATATATAACCAAGCAACTATTGGGTCATAAAGATATTAAAGTAACACTAAGTTACATTGAGGATGACATTG
AAATGGTTAGGAAATATGCAAATTCTCTTTGA

Protein sequence :
MSKVSFDILLDSFFFHRRLRTDTIKSYKKAMRQLQKNCKLDSPEDLSTTDLLRWRKNVLDKSIRPITWNSYIRQLKTIFK
FGIEHKILSFDKNPLDGLFVKEGRHRKKVYSPEQLRKLSCGIKENANLPKIIRPTWFIQTLIMTFRCTAIRRAQLTKLKI
QDIDLEKRIIYISPEINKNHDYHTLPISDTLYPYLAKLIDRLHKFKQPSNTQLFNLNLFSNAVKRKGKSMTEDQVSYLFK
VISKYTGVISSPHRFRHTAATNLMRNPENLYITKQLLGHKDIKVTLSYIEDDIEMVRKYANSL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Pmu_02880 YP_005176187.1 tyrosine recombinase-2 family protein Not tested ICEPmu1 Protein 2e-71 53
Pmu_02700 YP_005176176.1 tyrosine recombinase-1 family protein Not tested ICEPmu1 Protein 2e-62 45