Gene Information

Name : NT05HA_1034 (NT05HA_1034)
Accession : YP_003007490.1
Strain : Aggregatibacter aphrophilus NJ8700
Genome accession: NC_012913
Putative virulence/resistance : Virulence
Product : single-stranded DNA-binding protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0629
EC number : -
Position : 1050488 - 1050979 bp
Length : 492 bp
Strand : +
Note : identified by Glimmer3; putative

DNA sequence : 
ATGGCTGGAGTAAATAAAGTTATTATCGTTGGTAATCTTGGAAATGAACCGGAAATGAGAACCATGCCAAATGGTGAAGC
CGTAGCCAATATCAGTGTAGCAACCAGCGAAGCTTGGATTGACAAAAATACCGGGGAACGCCGTGAGGTAACTGAATGGC
ACCGTATTGTATTTTATCGTCGCCAGGCAGAAATATGCGGAGAATACTTACACAAAGGCTCGAAGGTATACATTGAGGGG
CGTTTAAAAACTCGGAAGTGGCAAGACCAGAATGGTCAGGACCGCTATACCACAGAAATCCAAGGTGATGTTTTACAAAT
GCTCGACAATCGTCCGTCTAATTCATTAGCCCAAACATCCGGAACAAATACCGGACCGAAACAGGGAGACAAACCAGTAC
CATCACAACAGCGGATGGATAATTTTGACGATGACATTCCCTTTGCGCCAATTGCTCATGGGTTAACCAAAAGTGCGGTG
CATATTTTATAA

Protein sequence : 
MAGVNKVIIVGNLGNEPEMRTMPNGEAVANISVATSEAWIDKNTGERREVTEWHRIVFYRRQAEICGEYLHKGSKVYIEG
RLKTRKWQDQNGQDRYTTEIQGDVLQMLDNRPSNSLAQTSGTNTGPKQGDKPVPSQQRMDNFDDDIPFAPIAHGLTKSAV
HIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssb1 YP_005176252.1 single-stranded DNA-binding protein Not tested ICEPmu1 Protein 6e-51 75
ssB NP_458627.1 single strand binding protein Not tested SPI-7 Protein 3e-38 51
ssb NP_807839.1 single-stranded DNA-binding protein Not tested SPI-7 Protein 3e-38 51
ssb AAF14810.1 single strand binding protein Not tested SPI-7 Protein 2e-38 51
ssb AAC26638.1 single-strand binding protein Not tested SPI-4 Protein 2e-25 45

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
NT05HA_1034 YP_003007490.1 single-stranded DNA-binding protein VFG0576 Protein 2e-33 50