Gene Information

Name : Dd1591_0930 (Dd1591_0930)
Accession : YP_003003286.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : GTP-binding protein HSR1-related
Function : -
COG functional category : R : General function prediction only
COG ID : COG3596
EC number : -
Position : 1080810 - 1081676 bp
Length : 867 bp
Strand : +
Note : PFAM: GTP-binding protein HSR1-related; KEGG: ecd:ECDH10B_0238 CP4-6 prophage; GTP-binding protein

DNA sequence :
ATGAGTAAACAAGAAGGTATCAACGCTATCAGCAAGGCAATGGCCGAGCTGCCCACACAACTGTCTGGCACCATCCTAAA
ACACATTCACTCGCTTACCGACTATGAGCCGGTGATCGGCATTATGGGCAAAACCGGGGCAGGAAAATCCTCACTGTGTA
ATGCGTTGTTTGCCGGTGAGGTGTCGCCGGTCAGTGATGTGGCGGCCTGTACCCGTGAGCCGTTGCGTTTTCGCCTTAAC
GTGGGTGAGCGTTGTATGACGCTGGTAGACCTGCCCGGTGTCGGTGAAAGTGAACGGCGTGATACTGAGTATGCTGCGAT
GTATCGCCAGCAACTTCCGCATCTCGATCTGGTGCTGTGGCTAATCAAGGCCGATGACCGGGCGCTGGCGGTGGACGAGC
ACTTTTACCATCAGGTGATTGGCGAAGCCTGGCGGCACAAGGTGTTGTTTGTGGTCAGTCAGGCGGACAAGATTGAACCC
ACCGAGGGCGGCGTGAAGGCGTTGTCTGCCACACAGAAACAGAGCCTTGCGCGCAAAATCGCCCTGCTGCACACCCTGTT
TTTGCCGGTGCATCCGGTCTGTGCGGTTTCGGTGCGGCTGCGCTGGGGGCTGTCGCACATGGCGGCGCTGATGGTGGCAA
GCCTGCCGCGCGAAGCCAGCAGCCCGCTGGTCACACAGCTACAGCCGCCCTTTCGTAGCGAACGCGTCACTCAAAAAGCC
CGCGATGATTTTGCCGATACGGTGGGCAGCACGCTCGATAGCGTCAGCCGTCTGCCGCTGATACCGGCCACGGTGCGCAC
GCTTATCCAGACGCTGCGCGATACCGTGGTGTCCGTGGCCCGCGCTTTGTGGGCGGTGTTCTTCTGA

Protein sequence :
MSKQEGINAISKAMAELPTQLSGTILKHIHSLTDYEPVIGIMGKTGAGKSSLCNALFAGEVSPVSDVAACTREPLRFRLN
VGERCMTLVDLPGVGESERRDTEYAAMYRQQLPHLDLVLWLIKADDRALAVDEHFYHQVIGEAWRHKVLFVVSQADKIEP
TEGGVKALSATQKQSLARKIALLHTLFLPVHPVCAVSVRLRWGLSHMAALMVASLPREASSPLVTQLQPPFRSERVTQKA
RDDFADTVGSTLDSVSRLPLIPATVRTLIQTLRDTVVSVARALWAVFF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sap NP_838477.1 hypothetical protein Not tested SHI-1 Protein 3e-65 52
unnamed AAL99256.1 unknown Not tested LEE Protein 3e-65 52
Z1210 NP_286745.1 histone Not tested TAI Protein 4e-64 51
Z1650 NP_287153.1 hypothetical protein Not tested TAI Protein 4e-64 51
unnamed CAD66199.1 hypothetical protein Not tested PAI III 536 Protein 2e-65 51
sap NP_708764.1 hypothetical protein Not tested SHI-1 Protein 9e-65 51
unnamed AAL08471.1 unknown Not tested SRL Protein 1e-65 51
ECO103_3582 YP_003223441.1 hypothetical protein Not tested LEE Protein 2e-65 51
unnamed AAK00473.1 unknown Not tested SHI-1 Protein 7e-65 51
aec64 AAW51747.1 Aec64 Not tested AGI-3 Protein 3e-65 51
yeeP ADD91709.1 YeeP Not tested PAI-I AL862 Protein 3e-65 51
APECO1_1093 YP_853113.1 hypothetical protein Not tested PAI IV APEC-O1 Protein 8e-64 51
yeeP CAE85196.1 YeeP protein Not tested PAI V 536 Protein 1e-64 51

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_0930 YP_003003286.1 GTP-binding protein HSR1-related VFG0654 Protein 4e-65 51
Dd1591_0930 YP_003003286.1 GTP-binding protein HSR1-related VFG1062 Protein 6e-66 51
Dd1591_0930 YP_003003286.1 GTP-binding protein HSR1-related VFG1674 Protein 1e-65 51