Gene Information

Name : Dd1591_0080 (Dd1591_0080)
Accession : YP_003002452.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG1136
EC number : -
Position : 97467 - 98174 bp
Length : 708 bp
Strand : +
Note : PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: cps:CPS_2119 ABC transporter, ATP-binding protein

DNA sequence : 
ATGACGGTGCTGGTTCAACTTGATAATGTGCATAAAATTTTTCTTACCGATGAAATTGAAACTCATGCCCTTAGCAAGAT
AAACCTTTCTATTCACACGGGAGAATACGTCTCTATCGCGGGGCCGTCCGGTTGTGGGAAGTCGACGTTGCTGTCCATTA
TGGGATTGCTGGATACGCCGACGGAAGGGCAATACCGATTGAACGGCACGGATGTGGAGCGCATCAGCCGCCGGGAGATG
GCCCGGCTGCGCAACCGGGAAATCGGTTTTATCTTTCAGTCCTTCAACCTGATAAGCGATTTGACCATCGCGGAAAACGT
GGCGCTGCCGCTGACTTACCGTAAAGAGTTGTCGCGTGCTGAACAGAAAGCGCGGGTGATTCAGGCGCTGGAGAAGGTCA
ATATGTCGCATCGCGTACGGCATTACCCTTCACAGTTATCCGGTGGGCAGCAGCAACGGGTTGCCGTCGCACGCGCTATT
GTCGGCAAACCGTCGTTATTACTGGCGGATGAACCCACCGGTAACCTGGATTCCGCCAATGCCGAAGCGGTGATGAATAT
TCTGGATGAGCTGCATCAGGACGGCGCGACCATCTGCATTGTTACCCATGACCCGCGTTCCGCCATGCGCGCTCAGCGTA
CCATTGTGCTGTCCGACGGACAGGTCGTGGCCGATGGCGAAAACGGGCAACTGCGTCAGGCGGTATAA

Protein sequence : 
MTVLVQLDNVHKIFLTDEIETHALSKINLSIHTGEYVSIAGPSGCGKSTLLSIMGLLDTPTEGQYRLNGTDVERISRREM
ARLRNREIGFIFQSFNLISDLTIAENVALPLTYRKELSRAEQKARVIQALEKVNMSHRVRHYPSQLSGGQQQRVAVARAI
VGKPSLLLADEPTGNLDSANAEAVMNILDELHQDGATICIVTHDPRSAMRAQRTIVLSDGQVVADGENGQLRQAV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Cp1002_1464 YP_005681730.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 9e-31 42
CpC231_1466 YP_005683828.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-33 41
cpfrc_01473 YP_003783873.1 hypothetical protein Not tested PiCp 5 Protein 8e-33 41
CpI19_1473 YP_005685914.1 ABC transporter ATP-binding protein Not tested PiCp 5 Protein 8e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_0080 YP_003002452.1 ABC transporter NC_008702.1.4606598. Protein 1e-45 49
Dd1591_0080 YP_003002452.1 ABC transporter NC_012469.1.7686878. Protein 4e-50 45
Dd1591_0080 YP_003002452.1 ABC transporter CP001581.1.gene798.p Protein 1e-37 43
Dd1591_0080 YP_003002452.1 ABC transporter NC_012469.1.7686946. Protein 2e-29 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_0080 YP_003002452.1 ABC transporter VFG0869 Protein 3e-24 41