Gene Information

Name : Dd1591_0741 (Dd1591_0741)
Accession : YP_003003100.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Unknown
Product : Hcp1 family type VI secretion system effector
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 852670 - 853137 bp
Length : 468 bp
Strand : +
Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: plu:plu0404 hypothetical protein

DNA sequence :
ATGTCACATATTGTATATTTGACGTTAGAGGGTGAAAAGCAAGGGTTAATTTCATCAGGATGTTCTACCCTTGATTCGAT
CGGAAATAGATACCAACGTGGGCATGAAGACCAAATACAAGTATTGAGCCTAAACCATACTATAACCAGAGAAGACAATG
TAGCGCACCACCCAGTGCAATTGACTAAACCTATAGATAAATCATCCCCATTACTTGGTGTTTCAGTTTCGACGAATGAA
TCGCTTACAGCAACGTTTTATTTTTATCGAACCAATCAGGCTGGACAGTTAGAGATCTTTTATGAGCTTAAACTGACTGG
TGCCAGAGTTGTTGCTGTTTCATCAACATATCCCCACTCAATTAATAATACAGAGTTAATTCCTTTTGAAGATGTTATGC
TAAGATATAATACTATATCTTGGTCACATAAAATTGCAGGTACGTCAGGATATAGTATTTGGGGGTGA

Protein sequence :
MSHIVYLTLEGEKQGLISSGCSTLDSIGNRYQRGHEDQIQVLSLNHTITREDNVAHHPVQLTKPIDKSSPLLGVSVSTNE
SLTATFYFYRTNQAGQLEIFYELKLTGARVVAVSSTYPHSINNTELIPFEDVMLRYNTISWSHKIAGTSGYSIWG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec32 YP_851413.1 hypothetical protein Not tested PAI II APEC-O1 Protein 2e-36 53
aec32 AAQ96726.1 Aec32 Not tested AGI-1 Protein 1e-36 53
orf23 AAO17189.1 Orf23 Not tested tcd island Protein 1e-33 48