Gene Information

Name : alr (Dd1591_0708)
Accession : YP_003003068.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Unknown
Product : alanine racemase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0787
EC number : 5.1.1.1
Position : 820789 - 821865 bp
Length : 1077 bp
Strand : -
Note : converts L-alanine to D-alanine which is used in cell wall biosynthesis; binds one pyridoxal phosphate per monomer; forms a homodimer

DNA sequence :
ATGAAAACGGCAACCGCCGTCATTGATCGTCAGGCTTTACGCCATAATCTGCAACATATCCGGCAGATGGCGCCGCAAAG
CCGGCTGATCGCCATCGTCAAAGCCAACGCTTACGGGCACGGCGCGGTAGAAGCCGCCCGCGCTTTTTCCGATGCCGACG
GTTATGGCGTCTCCCGCCTCAGCGAAGCGCTGGCGCTGCGCACCGCCGGCATCACCAAACCGATCCTGCTGCTGGAAGGC
TTCTTCGCAGCCGATGAGTTGCCGTTGCTGGCCGAACATCAGTTGGAAACCGCCGTACACTGTGAAGAACAGCTCGCCGC
GCTGGAACAGGCGCACCTGCCGCATCCGCTGACGGTGTGGATGAAGCTCGATACCGGTATGCACCGTCTCGGCGTGCTGC
CGCAACAGGCCGAGGCGTTTTATGCCCGGCTCAGCCGCTGCTCCAACGTGGTGCAGCCGGTGAATATCATGAGCCACTTT
TGCCGTGCGGATGAACCACAAACAGACACCACCCAACGCCAGCTCGACTGTTTCGACGCCTTTGCACAGGGCAAGCCGGG
CCGCCAGTCTATCGCCGCCTCCGGCGGGATTCTGCTGTGGCCGCAAGCCCACCGTGATCAGATTCGTCCCGGCATTATCC
AGTACGGCGTCTCGCCGCTGGCCGAGGGCGACGCCAGCCAATGGCAGCTTAAACCGGCGATGACGTTAACCTCACGTCTG
ATCGCAGTCCGCGAGCACCCTGCCGGCGAGCCGGTAGGGTACGGCAGCCTCTGGAGCAGCCCGCGCGACACCCGCCTCGG
TGTGATCGCCATCGGCTACGGCGACGGCTACCCGCGCGATGCCAAAAGCGGCACCCCGGTGTGGATCAACGGTCGCGAGG
TTCCGCTGTCCGGACGGGTATCGATGGACATGATCACCGTCGATCTGGGGCCGGACGCCCAGGACAAGGTTGGCGATGAA
GTCATCTTGTGGGGCGGGCCGCTGCCGGTGGAGAAAATCGCCGCCCACAACGGCATCAGCGCCTATGAATTGATTACTCG
CCTGACAGCCCGTACCGAACTGGAATACATCGGCTAG

Protein sequence :
MKTATAVIDRQALRHNLQHIRQMAPQSRLIAIVKANAYGHGAVEAARAFSDADGYGVSRLSEALALRTAGITKPILLLEG
FFAADELPLLAEHQLETAVHCEEQLAALEQAHLPHPLTVWMKLDTGMHRLGVLPQQAEAFYARLSRCSNVVQPVNIMSHF
CRADEPQTDTTQRQLDCFDAFAQGKPGRQSIAASGGILLWPQAHRDQIRPGIIQYGVSPLAEGDASQWQLKPAMTLTSRL
IAVREHPAGEPVGYGSLWSSPRDTRLGVIAIGYGDGYPRDAKSGTPVWINGREVPLSGRVSMDMITVDLGPDAQDKVGDE
VILWGGPLPVEKIAAHNGISAYELITRLTARTELEYIG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
dadX AAC61705.1 alanine racemase Not tested PAI I CFT073 Protein 4e-55 41