Gene Information

Name : Dd1591_0626 (Dd1591_0626)
Accession : YP_003002987.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : hypothetical protein
Function : -
COG functional category : N : Cell motility
COG ID : COG2804
EC number : -
Position : 710885 - 712306 bp
Length : 1422 bp
Strand : -
Note : PFAM: type II secretion system protein E; SMART: AAA ATPase; KEGG: eca:ECA3799 hypothetical protein

DNA sequence :
ATGACGCAAGATAAACAACACCAGGAGCTGCAGCGACTTTGCCGTCGCTATCATGCCTTACTGCTGGATATGGACGAGCA
AGTAATTTCCGTTGCCGTAGCCGGGTCGGTTGCAGAAGAGCTGGTCGCCGCGCTACGTTTCGCCAGCCACCGGCGGGTTC
TGGTAGAACAATGGCCCGCTGCACGACTGGAACAACAGTTGACGTCACCACAGGCCGAAGAAACGACGGCACCTTATCAA
ACCAATACGGCAGTATACGAAGAACAGGATGATGCGCCGGTTGTCCAGTTTATCAATCAAACGCTGAAACTGGCGATCCA
GCGCCGTGCTTCCGATATCCATCTGGAACCGCTGCCTGCCGGTTATCGCGTCAGGTTGCGTATCGACGGGGTGTTGCATG
AAATTCCATCCGAGCAGGATTTGCCGACAAACCGTATGATCGCTCGGCTGAAAATCCTGGGGAAACTCAATATCGCCGAA
CGGCGTTTGCCGCAGGATGGCCAATTCACTCTCCGACTGGAGACAGATACCTATTCGCTGCGCATTGCCACCCTGCCGGT
CCAGAACGGTGAGAAAGTTGTGCTCAGGATATTGCAGACTCAGCAACAGGCGCTGGAACTGGACGAACTCGGCCTGTCTG
AGCAATGGCTGCAACACGTCAAGCAAACACTCAGCCTGCCGCAAGGTCTGATTCTGGTTACCGGCCCTACCGGTAGCGGT
AAAACATTTACGCTGTATAGCGCCATTCGCTGGCTAAATGACGTCACCCGCAATATTTGCAGTGTGGAAGACCCGGTAGA
GATTCCATTAGCCGGCATCAATCAAACGGCTATCCATATACAGGGACAGTTGGATTTCGCCCGGGTATTACGCGCGCTAC
TACGCCAGGATCCCGATGTTGTCATGATCGGCGAAATTCGTGATGCCGAAACCGCCGAAATCGCCGTTAAGGCCGCTCAA
ACAGGTCACCTGGTACTCTCCACCCTGCATACCAACTCTGCTCTTGATACGCTGATTAGGCTAGGACACCTCGGCATTCC
CGGTTATCTGCTGGCTGCGGCACTCAAACTGGTGATAGCACAACGGCTGGTAAGAAAATTGTGCCCACACTGTCGGCAGT
GGGTGGCAGACGTCACAACCCTGCCGGACAGTCTATGGCAAGGCCCACTGCAACATTGGCGGGCAACAGGATGTGAACAC
TGTTTTTCCGGTTACTACGGCCGGGCGGCCATTTATGATTTATTGCCGATCACACCTGAGCTTCAGCAGGCTTTATCTTG
TTCTCCATCGCTATCTGATAACGACCCGACACACTCTTTGCACCGGGAAAACCGGTTACTCTCCGCCGGGTTAGCGTTGG
TTCACGAAGGTATCACCTCACTGGAAGAACTCTACCGTGTTGTAGGCAATCACATTGAATAG

Protein sequence :
MTQDKQHQELQRLCRRYHALLLDMDEQVISVAVAGSVAEELVAALRFASHRRVLVEQWPAARLEQQLTSPQAEETTAPYQ
TNTAVYEEQDDAPVVQFINQTLKLAIQRRASDIHLEPLPAGYRVRLRIDGVLHEIPSEQDLPTNRMIARLKILGKLNIAE
RRLPQDGQFTLRLETDTYSLRIATLPVQNGEKVVLRILQTQQQALELDELGLSEQWLQHVKQTLSLPQGLILVTGPTGSG
KTFTLYSAIRWLNDVTRNICSVEDPVEIPLAGINQTAIHIQGQLDFARVLRALLRQDPDVVMIGEIRDAETAEIAVKAAQ
TGHLVLSTLHTNSALDTLIRLGHLGIPGYLLAAALKLVIAQRLVRKLCPHCRQWVADVTTLPDSLWQGPLQHWRATGCEH
CFSGYYGRAAIYDLLPITPELQQALSCSPSLSDNDPTHSLHRENRLLSAGLALVHEGITSLEELYRVVGNHIE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gspE CAE85233.1 GspE, hypothetical type II secretion protein Not tested PAI V 536 Protein 1e-67 44
gspE YP_854406.1 type II secretion protein GspE Not tested PAI I APEC-O1 Protein 1e-67 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_0626 YP_003002987.1 hypothetical protein VFG2426 Protein 2e-77 48
Dd1591_0626 YP_003002987.1 hypothetical protein VFG1880 Protein 3e-81 47
Dd1591_0626 YP_003002987.1 hypothetical protein VFG2048 Protein 2e-69 44
Dd1591_0626 YP_003002987.1 hypothetical protein VFG0182 Protein 9e-73 43