Gene Information

Name : Dd1591_0574 (Dd1591_0574)
Accession : YP_003002935.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Unknown
Product : Hcp1 family type VI secretion system effector
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 656620 - 657168 bp
Length : 549 bp
Strand : +
Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA1069 hypothetical protein

DNA sequence :
ATGGAGAATTTAATTATTATCGTAGATGTGTATATCACTTGTTTATGTTTATTAGGTAAAGGGATTTTTATGGCTAATAT
CATTTATCTGAAAATAGAAGGCAAAAACCAAGGGCTGATCTCTTCAGGGTGTGGCTCTTATGACTCAATGGGGAACAAAT
GGCAACAAGGTCATGAGAATGAAATCTTTGTCTATGAGTTAAATAATGCGGCAGAGCGCATCGATAATGTTGCATATCAA
CCTGTTGAAATTAGGAAGCCCATTGATAAATCGACACCATTATTATTGAGCGCATTAAACGAAAATGAATACTTAACCTG
TACCTTCATTTTCTACCGAACCTCAGAGAATGGAGGGATGGAGCAATATTTCTCAATAAAATTGACCGATGCAAAAGTAA
AAAATATCAGAATGCACTATCCCAGTTCAATAACGCACAATGAATATCAACCAGAAGAGTTTATCTCTTTTACCTATAAA
AACATGCTGTGCGAACATATCAAAGCTGGAACCAGTGCATATTGTATTTGGGAAAGTCAGTCGTTTTAA

Protein sequence :
MENLIIIVDVYITCLCLLGKGIFMANIIYLKIEGKNQGLISSGCGSYDSMGNKWQQGHENEIFVYELNNAAERIDNVAYQ
PVEIRKPIDKSTPLLLSALNENEYLTCTFIFYRTSENGGMEQYFSIKLTDAKVKNIRMHYPSSITHNEYQPEEFISFTYK
NMLCEHIKAGTSAYCIWESQSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec32 YP_851413.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-30 48
aec32 AAQ96726.1 Aec32 Not tested AGI-1 Protein 7e-31 48
orf23 AAO17189.1 Orf23 Not tested tcd island Protein 9e-33 47