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Name : Dd1591_0466 (Dd1591_0466) Accession : YP_003002832.1 Strain : Dickeya zeae Ech1591 Genome accession: NC_012912 Putative virulence/resistance : Unknown Product : DNA topoisomerase III Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0550 EC number : - Position : 534110 - 536122 bp Length : 2013 bp Strand : - Note : KEGG: xcv:XCV2287 DNA topoisomerase III; TIGRFAM: DNA topoisomerase III; PFAM: DNA topoisomerase type IA central domain protein; TOPRIM domain protein; DNA topoisomerase type IA zn finger domain protein; SMART: DNA topoisomerase I DNA-binding; DNA topoiso DNA sequence : ATGCGGTTATTTCTGTGTGAAAAGCCTTCTCAGGGCAAAGACATCGGGCGTGTGCTGGGTACTACTCAGCGAGGCAATGG TTGCCTCACAGGTTCAGGCATCACCGTGACCTGGTGCATTGGTCATCTCGTTGAGGCAGCACCACCCGAAACTTATGGTG AGCAGTACAAGCGCTGGTCCATCGAACAGTTGCCCATTATCCCCGAGTGCTGGCGTGTCGAAGTCAAATCCAAGACCGCC TCGCAATTCAACGTCGTCAAAGAGCTTCTGAGCAAGGCAACCGAACTGGTCATCGCGACCGATGCGGATCGTGAAGGCGA ACTGATCGCCCGCGAGATCATCGAGCTATGCGGCTATCGCGGCCCTATCCAACGCCTTTGGCTATCAGCGTTGAACGACA CGTCGATCCGCAAAGCCCTGTCAGTTCTCAGACCATCTGACGAGACGCTACCTATGTACTTCTCGGCACTGGCTCGTTCC CGTGCGGACTGGCTGATCGGCATGAACCTCAGTCGCCTGTTCACCGTGCTGGGACGACAGGCCGGATACGACGGCGTACT CTCCGTTGGCCGGGTACAAACCCCGACACTGAAACTGGTTGTCGATCGCGACCGCGAGATCGCACGCTTTGTCTCTGTAC CGTTCTGGGCTGTTGAAGTCGTGCTGTCGAGCGCGGGCCAACATTTCACTGCCGCCTGGCTGGCACCTGATACAGCTGCT GATAATGCGGGTCGCTGTCTGCAGGAACCCATAGCCAGGCAGGCAACCGAACGTATGCGTGTTACTGGCAGCGCACAGGT AACGTCAGTCGAAACAGAGCACATGCGTGAAGGCCCCCCGCTGCCGTTCGATCTGGGAACGCTGCAAGAGGTCTGTTCGA GGCAACTGGGTCTCGACGTACAGGAAACGCTGGAAATCGCTCAGGCACTGTACGAAACGCATAAAGCGACAACGTACCCG CGTTCAGACTCCGGCTACCTGCCCGAAAGCATGTTCGCCGAGGTGCCTATTGTATTCGATAGCTTGCTCAAGACCGATCC AGACCTGAGGCCGATCGTCGATCTGTTAGACAGAAACCAGCGCTCACGCGCCTGGAACGACAGCAAAGTTACTGCGCACC ATGGCATCATTCCCACGCTCGAACCCGCTAACCTGGCAGCCATGAGCGATAAGGAGCGGGCAGTCTATACGCTGATCCGT ACCCACTACCTGGCGCAGTTTTTGCCACATCATGAATTCGACCATACCACTGCATACCTGTCTTGCGCAGGCGAGATGCT GCAGGCGGTCGGCAAGCAAGTAGTCTTAGTAGGCTGGCGACGGGTACTCACCGAGCCTAAGCCTGACGACGATGGCGATA CCACATCACGCAGTCAGGTTCTGCCACCGCTGAACGAAGGATTATCCTGCCAGATCACTGGCATCGACTGCAAAGCGCTC AAGACATCGCCGCCACGCCCTTATACCCAGGGTGAACTGGTTAAATCGATGAAGAGCGTTGCCAAACTGGTCTCAGATCC ACGCCTGAAGCAAACGTTAAAAGACACCACCGGTATTGGTACTGAGGCGACACGCGCCAATATCATCAAGGGATTGCTTG ACCGTGGCTATCTCTTGAAGAAAGGCCGCTCGGTACGCGCTTCCGATGCCGCCTTCACACTTATCGATGCCGTTCCCGGT GCTATTGCCGACCCCGGCATGACCGCCATATGGGAACAGGCGTTGGATATGATCGAATCAGGCCAGCTCACACTCGACGT CTTCATCGACAAGCAGTCAGCCTGGATCGCGCAACTGATACAGCAGTATCGGGGAGCATCCTTATCCATCCAGATGCCAC TGGGGCCCGCATGCCCTGAATGCGGCACGCCCATGCATCAGAGGCCCGGCAAGAACGGAGCGTTCTGGTCTTGCCCGCGC TATCCCGATTGCAGAGGCTCGCTGCCTATCGACAGCGGCAAGCGTAAACGCACCACGCCACGCAAACGTAACAGCAGTCT CCAGGCATCCTGA Protein sequence : MRLFLCEKPSQGKDIGRVLGTTQRGNGCLTGSGITVTWCIGHLVEAAPPETYGEQYKRWSIEQLPIIPECWRVEVKSKTA SQFNVVKELLSKATELVIATDADREGELIAREIIELCGYRGPIQRLWLSALNDTSIRKALSVLRPSDETLPMYFSALARS RADWLIGMNLSRLFTVLGRQAGYDGVLSVGRVQTPTLKLVVDRDREIARFVSVPFWAVEVVLSSAGQHFTAAWLAPDTAA DNAGRCLQEPIARQATERMRVTGSAQVTSVETEHMREGPPLPFDLGTLQEVCSRQLGLDVQETLEIAQALYETHKATTYP RSDSGYLPESMFAEVPIVFDSLLKTDPDLRPIVDLLDRNQRSRAWNDSKVTAHHGIIPTLEPANLAAMSDKERAVYTLIR THYLAQFLPHHEFDHTTAYLSCAGEMLQAVGKQVVLVGWRRVLTEPKPDDDGDTTSRSQVLPPLNEGLSCQITGIDCKAL KTSPPRPYTQGELVKSMKSVAKLVSDPRLKQTLKDTTGIGTEATRANIIKGLLDRGYLLKKGRSVRASDAAFTLIDAVPG AIADPGMTAIWEQALDMIESGQLTLDVFIDKQSAWIAQLIQQYRGASLSIQMPLGPACPECGTPMHQRPGKNGAFWSCPR YPDCRGSLPIDSGKRKRTTPRKRNSSLQAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| topB | AAN62194.1 | putative DNA topoisomerase III | Not tested | PAGI-2(C) | Protein | 0.0 | 78 |
| topB | AAN62317.1 | putative DNA topoisomerase III | Not tested | PAGI-3(SG) | Protein | 0.0 | 74 |
| pph56 | CAI36097.1 | Topoisomerase IA | Not tested | PPHGI-1 | Protein | 0.0 | 61 |
| topB | NP_458624.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-171 | 49 |
| topB | NP_807836.1 | DNA topoisomerase III | Not tested | SPI-7 | Protein | 2e-171 | 49 |
| topB | AAF14809.1 | topoisomerase B | Not tested | SPI-7 | Protein | 2e-171 | 49 |
| topB1 | YP_005176228.1 | DNA topoisomerase III | Not tested | ICEPmu1 | Protein | 7e-166 | 49 |
| PMI2630 | YP_002152332.1 | DNA topoisomerase III | Not tested | Not named | Protein | 3e-166 | 48 |
