Gene Information

Name : Dd1591_4250 (Dd1591_4250)
Accession : YP_003006520.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Unknown
Product : hypothetical protein
Function : -
COG functional category : V : Defense mechanisms
COG ID : COG0610
EC number : -
Position : 4796480 - 4799563 bp
Length : 3084 bp
Strand : -
Note : PFAM: protein of unknown function DUF450; type III restriction protein res subunit; SMART: DEAD-like helicase; KEGG: tbd:Tbd_2685 DEAD/DEAH box helicase

DNA sequence :
ATGAAGCAGACTACCGAAAAAGCCTTCGAATCATACGTGGAGCAGATGCTGCTAGCCAAAGGCTGGCAGTCAGGCTACAC
CAGCGGCTGGGACCGTGAACGGGCACTCTTCCCACAAGCGATCACAGACTTTATCGCCACAACCCAGCCGCAGCTGTGGA
AGGCGATGCGCAACCAGCACGGGGAACAATTGGAAGCGATGCTGCTTGCCACTCTTCTCAAGGAGCTGGCCATCAAAGGC
TCGTTGCATGTGCTGCGCCACGGTTTCAAGTTCTACGGCAAGACCTTTCGGCTGGCCTACTTCAAGCCTGCCCACGGCCT
TAACGAAGAGGTACTGGTTCATTACCGAGCCAACCAGCTCACCGTCACCCGACAGGTACCCTGCCATCCAGGCGACCATT
CTACTGTCGATCTGGTCTTTGCCATCAACGGCCTGCCGGTGGCAACCTGCGAGCTGAAAAATCCTTGGACCGGCCAGAGC
TGGCGCAATGCGGTGCGGCAGTATAAAGAAGACCGTAACCCACGCGCACCGCTATTCGAATTCAAGCAGCGAGCACTGGT
GCACTTCGCCGCTGACCCGGACGAAGTGCATATGACCACCCGACTGGCCGGAGGCAAGACTTTCTTTCTGCCCTTCAATC
GAGGCAGCCATCCCGGCGAGGTGCAATGCGGTGCGGGTAACCCGCAACACCCCTCCGGCCACCGCACGGGCTATTTCTGG
GAAGAGGTACTTGAGCGCGAGAGCTTCCTCGACATCCTCGGCCACTTTGTCTTCATCGAGAAGAAGGAAGAAAAGGTGGA
CGATGGAAAAGGCGGCAGCCGTATGGCAAGCAAAGAGGCGATGATCTTCCCTCGCTATCATCAGTTGGACGCCACCCGTA
AATTGATCGCCGCAGCCCGCGCTGAGGGGCCAGGGCAGAACTATCTGATCCAGCACTCAGCGGGTAGTGGCAAGACCAAC
TCCATATCCTGGCTGTCGCACCGGCTGGCAAGCCTGCACAACAGCGACGATCACAAGGTGTTCGACTGCGTGATTGTCAT
CACCGATCGGCAGGTGCTTGACCGCCAGTTGCAAGATGCAATCTACCAGATTGAGCACGCTCAGGGGGTGGTCAAAGCCA
TCGACCAGGATTCGAAACAGCTGGCTGAAGCGTTGATTGACGGTACCAAGATTGTCGTCACCACACTTCAGAAGTTTCCT
TTTGTGCTGCGCGGTCTGCTCCATGCCGCAGGGGCCGAGAGCGTAGACGATCCTGATGAAGCTACCAAAGCGAAAGCCAA
GATCTGGGAGGCTGAGATCGGCAAGCGCCGTTATGCGGTGATAGTGGATGAGGCTCACTCCTCCCAAACCGGCGAGACGG
CGAGGGAGCTGAAGGCGATTCTGGGGGCGAAAACGGGTGGAGACGACGAAGAAACGGACTGGGAGGATGGCCTCAATCAG
GTAATAGCCTCGCGAGGTCGGCAGCCGAACCTAAGCTTTTTCGCCTATACCGCAACCCCCAAGGGCAAAACGCTGGAGCT
ATTTGGCCGCGTTGGAAGTAGCGGCAAGCCGGAGCCCTTCCATCTCTACAGCATGCGCCAAGCCATCGAGGAGCGCTTTA
TCCTCGACGTGCTGCAGAACTACACCACCTACAAGACCTATTTCAAGTTGGTTAAGGCAGTGGAAGATGACCCGAATCTG
CCGAAGAAGAAGGCAGCGCGGGCACTGGCCAAGTTTTTGGTACTGCACCCGACCAATATTGCCCAGAAGATAGAGGTGAT
CATCGAGCACTTCCGCAGCCATGTGCGTACCCATCTGGGAGGGCGGGCCAAAGCAATGGTAGTTACCAGTTCGCGTCTGC
AGGCAGTTAAGTACATGGAAGCCTTTCAACGTTACATCGATGAGCACGGTTACGACGACATTCGGTCGCTGGTAGCCTTC
AGCGGCACGGTGCGTGACCCAGAAACCGGTCTGGAATATACCGAACCGGGGATGAATACCGATGTGGTAAGCGGCAAGCC
GATCAGCGAAAAGCAATTACCGGAGCGCTTCGCTTCGCCCGATTACCAAGTACTGTTGGTAGCTAACAAGTACCAGACTG
GCTTCGATCAGCCACTACTGATGGCCATGTACGTGGATAAGAGGCTGGACGGTGTACAGGCGGTACAGACCCTGTCACGC
CTCAATCGCATGGTACCTGGTAAGGAGACCCCTTTCGTACTGGACTTCGTCAATGAGGCCGAAGATATCTATCGCGCTTT
CAAACCTTACTACGATACAACCAGTCTGCAAGAAAGCTCCGACCCCGCTCTGCTAGAACAACTCAAGCACGAACTGGATG
CCTTTCAGGTCTACCACTGGAACGAGGTAGAGGCGTTCGCCCGCATTTTCTACCGTGTGCCGGGCAAACATAACCCCGCC
GACCATGCCCACCTGCAGCGCCATTTACAACCGGCGGTGGATCGTTTCAAGGCGATGGAGGACGAGGAACAGCGTGGAGA
GTTCCGAGACAAACTGAGCGGTTACGTCAAGGTGTACAGCTTCCTGAGTCAGATCATCCCCTATGGCGACCCCGACCTGG
AGATGCTCTACAGCTTTGGCCGGTTCCTGCTGCCACACCTGCCACTGGAGCGCGACACCAGCGCCGTCAAGCTAGGTGAC
GAAGTGGGCCTGCAGTACTACCGTCTGCAACGGGTCTTTTCCGGTGCAATCGAACTGCGCGAGGGTGAAGGCGATTACGG
AGTGAAGAGCCCCACTGAGGTCGGTACCAGTAAGGCCAAGGAGGAGAAGGCGCCACTTTCCGAAATCATCGGAGTACTGA
ATGACCGCTTCGGTACTAACTTCACCGAGGAAGACCGGCTTTTCTTCGAACAAATCAGGGAAAAGGCCGCCAATTCCCCA
GAAGTGATCCGCCTACGACAGGCCAACCCATTTGACAAATTCCAGTTGGGTCTTCGCCAGATGCTGGAAGACCTGATGAT
TCAGCGGATGAGTGAGAACGACAAAATTGTCTCGCGCTACATGGACGACAAGGCCTTTGAGGATGCAGCCTTTGCTGTGT
TGTCCAAAGTTATCTATGACGCAATTCCAGGCTCGAGCGCTTAG

Protein sequence :
MKQTTEKAFESYVEQMLLAKGWQSGYTSGWDRERALFPQAITDFIATTQPQLWKAMRNQHGEQLEAMLLATLLKELAIKG
SLHVLRHGFKFYGKTFRLAYFKPAHGLNEEVLVHYRANQLTVTRQVPCHPGDHSTVDLVFAINGLPVATCELKNPWTGQS
WRNAVRQYKEDRNPRAPLFEFKQRALVHFAADPDEVHMTTRLAGGKTFFLPFNRGSHPGEVQCGAGNPQHPSGHRTGYFW
EEVLERESFLDILGHFVFIEKKEEKVDDGKGGSRMASKEAMIFPRYHQLDATRKLIAAARAEGPGQNYLIQHSAGSGKTN
SISWLSHRLASLHNSDDHKVFDCVIVITDRQVLDRQLQDAIYQIEHAQGVVKAIDQDSKQLAEALIDGTKIVVTTLQKFP
FVLRGLLHAAGAESVDDPDEATKAKAKIWEAEIGKRRYAVIVDEAHSSQTGETARELKAILGAKTGGDDEETDWEDGLNQ
VIASRGRQPNLSFFAYTATPKGKTLELFGRVGSSGKPEPFHLYSMRQAIEERFILDVLQNYTTYKTYFKLVKAVEDDPNL
PKKKAARALAKFLVLHPTNIAQKIEVIIEHFRSHVRTHLGGRAKAMVVTSSRLQAVKYMEAFQRYIDEHGYDDIRSLVAF
SGTVRDPETGLEYTEPGMNTDVVSGKPISEKQLPERFASPDYQVLLVANKYQTGFDQPLLMAMYVDKRLDGVQAVQTLSR
LNRMVPGKETPFVLDFVNEAEDIYRAFKPYYDTTSLQESSDPALLEQLKHELDAFQVYHWNEVEAFARIFYRVPGKHNPA
DHAHLQRHLQPAVDRFKAMEDEEQRGEFRDKLSGYVKVYSFLSQIIPYGDPDLEMLYSFGRFLLPHLPLERDTSAVKLGD
EVGLQYYRLQRVFSGAIELREGEGDYGVKSPTEVGTSKAKEEKAPLSEIIGVLNDRFGTNFTEEDRLFFEQIREKAANSP
EVIRLRQANPFDKFQLGLRQMLEDLMIQRMSENDKIVSRYMDDKAFEDAAFAVLSKVIYDAIPGSSA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
SAS0025 YP_042158.1 type I restriction enzyme protein Not tested SCC476 Protein 4e-175 42