Gene Information

Name : Dd1591_3977 (Dd1591_3977)
Accession : YP_003006256.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Unknown
Product : Hcp1 family type VI secretion system effector
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 4496129 - 4496608 bp
Length : 480 bp
Strand : +
Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA0176 hypothetical protein

DNA sequence :
ATGGCTAATTTAATCTATTTAACCATCGAAGGGAAAAACCAAGGTTTAATTTCTTCCGGATGTTCTAAATTTGAATCCAT
AGGTAATAAATACCAGAAATCACATGGCGATGAAATATTTGTACTATCATTTGAGCACGACATGACAAGAGCGATGAATA
TCAATCATATGCCTATTTCGTTCACAAAGCTCATTGATAAATCATCTCCATTACTTGGTGTAGCGATAACAGAAAATGAG
GAACTCTCGTTGCACTTTAAATTTTATAGAACATCAGAAACCGGCGGAGTTGAACTTTACTATTCAATAAAAGCAAATAA
AGCCTTTATTGTTAAACTTAGTGTTATCTATCCCCACGCCATAAATCATGCTGATAACCAACCTGAAGAACTCATAAGTA
TAAAATACTCTGACATTCAGTGGAACCACCACATTGCCAGAACATCAGGATACAGTATATGGGGAGAGAATAGTTTCTAA

Protein sequence :
MANLIYLTIEGKNQGLISSGCSKFESIGNKYQKSHGDEIFVLSFEHDMTRAMNINHMPISFTKLIDKSSPLLGVAITENE
ELSLHFKFYRTSETGGVELYYSIKANKAFIVKLSVIYPHAINHADNQPEELISIKYSDIQWNHHIARTSGYSIWGENSF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec32 YP_851413.1 hypothetical protein Not tested PAI II APEC-O1 Protein 1e-32 51
aec32 AAQ96726.1 Aec32 Not tested AGI-1 Protein 9e-33 51
orf23 AAO17189.1 Orf23 Not tested tcd island Protein 4e-33 47