Gene Information

Name : Dd1591_3426 (Dd1591_3426)
Accession : YP_003005717.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Unknown
Product : tyrosine recombinase XerD
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG4974
EC number : -
Position : 3896159 - 3897058 bp
Length : 900 bp
Strand : -
Note : TIGRFAM: tyrosine recombinase XerD; PFAM: integrase family protein; integrase domain protein SAM domain protein; KEGG: eca:ECA0770 site-specific tyrosine recombinase XerD

DNA sequence :
GTGCAGCAACAGGATCAGGTATTAATCGAGCAGTTTCTGGATGCGTTGTGGCTGGAACGTAACCTGGCGGAAAATACATT
GTCGTCCTATCGCAATGACCTGTGCTCGCTGGCGGAGTGGCTGGCGCACCATAACAGTGATCTGCTGCAGGCCCAGCCGT
TGGACCTGCAAGGTTTTTTGGCTGAGCGCCTGGAGGGCGGCTACAAAGCCACCAGCTCGGCTCGCTTGTTGAGCGCCATG
CGGCGCCTGTTTCAATATCTGTACCGTGAAAAACGACGCGCCGATGATCCGAGTGCGCCGTTGTCGTCCCCCAAGCTGCC
GCAGCGATTGCCGAAAGATCTCACGGAAGCGCAAGTGGAGGCGCTGTTGGCGGCGCCGGTCACCGATCAGCCGATCGAAT
TGCGGGATAAAGCGATGCTGGAACTGCTGTATGCAACCGGTCTGCGCGTCTCTGAACTGGTTGGGCTGACTATCAGCGAT
GTCAGCTTGCGGCAAGGCGTGGTGCGGGTAGTGGGAAAAGGCAACAAAGAGCGGTTGGTGCCGCTGGGGGAAGAGGCGGT
GTACTGGCTGGAACAGTATCTGGAGTTTAGCCGTCCGTGGTTGCTGAACGGCCAAACGCTGGATGTGCTGTTTCCCAGTA
ATCGGGCTCAGCAGATGACGAGGCAGACGTTCTGGCACCGTATCAAGCACTATGCGACACTGGCGTCTATTGACAGCAAT
AAACTTTCTCCGCATGTTTTGCGTCATGCCTTTGCAACCCACTTGCTGAATCACGGTGCGGATCTGCGAGTGGTACAGAT
GTTACTGGGCCACAGCGATCTGTCCACCACGCAGATTTATACCCATGTTGCGACGGAGCGGCTGAAACAACTGCATCAAC
AGCACCATCCCCGGGCATGA

Protein sequence :
MQQQDQVLIEQFLDALWLERNLAENTLSSYRNDLCSLAEWLAHHNSDLLQAQPLDLQGFLAERLEGGYKATSSARLLSAM
RRLFQYLYREKRRADDPSAPLSSPKLPQRLPKDLTEAQVEALLAAPVTDQPIELRDKAMLELLYATGLRVSELVGLTISD
VSLRQGVVRVVGKGNKERLVPLGEEAVYWLEQYLEFSRPWLLNGQTLDVLFPSNRAQQMTRQTFWHRIKHYATLASIDSN
KLSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLKQLHQQHHPRA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00307 YP_008207772.1 Site-specific recombinase XerD Not tested AbaR25 Protein 8e-58 50
BJAB0868_00311 YP_008211637.1 Site-specific recombinase XerD Not tested AbaR26 Protein 8e-58 50