Gene Information

Name : Dd1591_0310 (Dd1591_0310)
Accession : YP_003002679.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : DNA-binding transcriptional regulator BasR
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 365802 - 366500 bp
Length : 699 bp
Strand : -
Note : response regulator in two-component regulatory system with BasS

DNA sequence : 
ATGAAACTCTTGATTGTTGAAGATGATGCGTTGTTACAGGAAGGATTATTGCAGGCGATGCGCAACGAGGGTTATGTCTG
CGATTGCGCGTCCACGGCCAAAGAAGCAGATGCCCTGATTGCCAGCGCCCACTACAGCCTGGTCGTACTGGATTTAGGCT
TACCGGACGAAGACGGCCTCACCTTGCTCGGCCGTTGGCGCCGAAACCATTACCAGCAACCGGTGTTGATCCTCACCGCG
CGGGATACGGTGGACGACCGCGTAACCGGGCTGGACGTCGGCGCAGACGATTACATGATCAAACCCTTTGCGCTGAGCGA
GTTTCAGGCTCGCGTGCGTGCATTAATCCGTCGACATCAGGGATCCAGCGATAGCTGGATTCGGGTGGACAACATTACGC
TCGATCTCAACAATCAGCAGGTCATGCTGGACGACAAACCGATCGTACTGACGCCAAAGGAGTTCGCCATTTTATCGCGC
CTTATCCTCAAGGCCGGTTCGCAGGTACACCGCGAAGTATTGCATCAGGATCTTTACAGCTGGGATGATGACCCGTCGTC
GAATTCGCTGGAAGTACACATCCACAACCTGCGGCAAAAGATCGGCAAGAATCGCATTAAAACGCTGCGTGGTTTCGGTT
ACTTGCTGACCAAGGACGACCAATCCAAAGACGAGCAATCCAGGGAGGAGCAGCCATGA

Protein sequence : 
MKLLIVEDDALLQEGLLQAMRNEGYVCDCASTAKEADALIASAHYSLVVLDLGLPDEDGLTLLGRWRRNHYQQPVLILTA
RDTVDDRVTGLDVGADDYMIKPFALSEFQARVRALIRRHQGSSDSWIRVDNITLDLNNQQVMLDDKPIVLTPKEFAILSR
LILKAGSQVHREVLHQDLYSWDDDPSSNSLEVHIHNLRQKIGKNRIKTLRGFGYLLTKDDQSKDEQSREEQP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
armR AAN62112.1 putative response-regulator ArmR Not tested PAGI-2(C) Protein 7e-35 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_0310 YP_003002679.1 DNA-binding transcriptional regulator BasR BAC0487 Protein 1e-84 83
Dd1591_0310 YP_003002679.1 DNA-binding transcriptional regulator BasR NC_002516.2.879194.p Protein 4e-31 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_0310 YP_003002679.1 DNA-binding transcriptional regulator BasR VFG0473 Protein 9e-67 61