Gene Information

Name : Dd1591_3106 (Dd1591_3106)
Accession : YP_003005407.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : two component transcriptional regulator PhoB, winged helix family
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 3540333 - 3541022 bp
Length : 690 bp
Strand : -
Note : KEGG: eca:ECA1110 phosphate regulon response regulator; TIGRFAM: phosphate regulon transcriptional regulatory protein PhoB; PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver

DNA sequence : 
ATGGCAAGACGTATTTTGGTGGTGGAAGATGAAGCGCCGATTCGCGAGATGGTGTGCTTCGTGCTGGAGCAGAACGGCTA
TCAGCCGGTTGAAGCGGAGGATTACGACAGCGCGGTGACCCGGCTGGCCGAGCCTTACCCTGAACTGGTGCTGCTGGACT
GGATGCTGCCCGGCGGGTCCGGTTTGCAGTTTATCAAGCACATGAAACGCGAAGCGCTGACCCGTGATATTCCGGTCATG
ATGCTGACGGCCCGCGGCGAAGAAGAAGATCGCGTACGCGGTCTTGAAGTCGGTGCCGATGATTACATCACCAAACCGTT
TTCACCTAAAGAGCTGGTGGCGCGCATTAAAGCGGTGATGCGCCGAATTTCGCCGATGGCGGTGGAAGAAGTGATCGAAA
TGCGTGGCTTAAGTCTGGACCCCTCTTCCCACCGGGTGACGACGGAAGAACATGCGCTCGATATGGGGCCGACGGAGTTC
AAGCTGTTGCACTTCTTTATGACCCACCCGGAGCGGGTATATAGTCGTGAGCAGTTGCTGAATCACGTATGGGGCACTAA
CGTGTATGTTGAGGATCGTACTGTGGATGTGCATATCCGCCGCCTGCGCAAGGCGCTGGAAACCAGTGGACACGACAAGA
TGGTTCAGACCGTTCGGGGAACTGGATACCGTTTCTCAACACGTTATTGA

Protein sequence : 
MARRILVVEDEAPIREMVCFVLEQNGYQPVEAEDYDSAVTRLAEPYPELVLLDWMLPGGSGLQFIKHMKREALTRDIPVM
MLTARGEEEDRVRGLEVGADDYITKPFSPKELVARIKAVMRRISPMAVEEVIEMRGLSLDPSSHRVTTEEHALDMGPTEF
KLLHFFMTHPERVYSREQLLNHVWGTNVYVEDRTVDVHIRRLRKALETSGHDKMVQTVRGTGYRFSTRY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed CAD42044.1 hypothetical protein Not tested PAI II 536 Protein 2e-34 41
c3565 NP_755440.1 response regulator Not tested PAI I CFT073 Protein 2e-34 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_3106 YP_003005407.1 two component transcriptional regulator PhoB, winged helix family HE999704.1.gene2815. Protein 4e-39 43
Dd1591_3106 YP_003005407.1 two component transcriptional regulator PhoB, winged helix family NC_010400.5986590.p0 Protein 2e-36 41
Dd1591_3106 YP_003005407.1 two component transcriptional regulator PhoB, winged helix family CP001138.1.gene2239. Protein 2e-34 41
Dd1591_3106 YP_003005407.1 two component transcriptional regulator PhoB, winged helix family CP000647.1.gene2531. Protein 1e-35 41
Dd1591_3106 YP_003005407.1 two component transcriptional regulator PhoB, winged helix family BAC0596 Protein 2e-34 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_3106 YP_003005407.1 two component transcriptional regulator PhoB, winged helix family VFG1563 Protein 1e-34 41
Dd1591_3106 YP_003005407.1 two component transcriptional regulator PhoB, winged helix family VFG1702 Protein 8e-35 41