Gene Information

Name : Dd1591_3090 (Dd1591_3090)
Accession : YP_003005391.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Unknown
Product : riboflavin biosynthesis protein RibD
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG1985
EC number : 3.5.4.26
Position : 3520544 - 3521656 bp
Length : 1113 bp
Strand : -
Note : KEGG: eca:ECA1126 bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase; TIGRFAM: riboflavin biosynthesis protein RibD; PFAM: bifunctional deaminase-reductase domain protein; CMP/dCMP deaminas

DNA sequence :
ATGGCTACATACTCTGATGAATTCTATATGGCTCGCGCACTGGAGCTTGCTCGCCGCGGGCGTTTTACTACGGCGCCGAA
TCCGAACGTCGGCTGTGTGATCGTCAGAGACGGCGAGATAGTCGGTGAGGGATACCACCAGAAAGCCGGCGAGCCCCATG
CCGAGGTACATGCGCTGCGTATGGCAGGCGACAAGGCGCACGGCGCTACGGCGTATGTGACGCTTGAGCCCTGTAGTCAT
CACGGGCGTACCCCGCCTTGCGCCGATGCGCTGGTTGCAGCCGGTGTGGCGCGGGTGGTCGCCGCGATGCAAGACCCTAA
CCCGCAGGTAGCCGGGCGCGGTTTGCATCGTTTACAACAAGCCGGTATCGCCGTGCATCACGGTGTCCTGATGGAGCAGG
CGGAAAAGATTAACCGCGGCTTTCTGAAGCGGATGCGCACCGGCTTCCCTTATGTACAACTCAAACTCGGGGCGTCGCTG
GATGGCCGGACGGCGATGGCGTCCGGTGAAAGCCAGTGGATCACCTCGCCGCAGTCTCGTCAGGATGTGCAGCGTTTTCG
CGCACAGAGTTCGGCTATTCTCAGCAGCAGCGCCACCGTGCTGGCGGATGATCCGTCGTTGACCGTGCGTTGGTCCGAGC
TGGATGAAGATACCCAGCGCCTCTACCCTGAAAGTGCGATGCGTCAGCCGGTACGCGTGATTGTCGATAGTCAGTCGCGC
GTGACGCCGCAGCATTGCCTGGTGAACCAACCGGGGCAGACCTGGCTGGCGCGTGCACGTCAGGATGATCAGTCATGGCC
GGATGGCGTAGAGCAACTGGAAATGCCGCTGCATGGCGGTGGTATCGATCTGGTTGGCCTGATGATGACGCTGGGTAAAC
GCCAGATTAATACGGTATGGGTGGAGGCGGGCCCTCGTCTGGCCGGTGCATTATTGCAAGCCGGCGTGGTGGATGAACTG
ATCGTCTATCTGGCGCCGAAATTATTGGGGGACGCAGCGCGATCGCTGTGCGTCCTGCCGGGGCTGGAACAGTTGTCGCA
GGCACCGATGTTCGATATGACGGATGTCTGCCAGATAGGGCCGGATGTTCGCCTGACGCTGAAGCCGCGTTAG

Protein sequence :
MATYSDEFYMARALELARRGRFTTAPNPNVGCVIVRDGEIVGEGYHQKAGEPHAEVHALRMAGDKAHGATAYVTLEPCSH
HGRTPPCADALVAAGVARVVAAMQDPNPQVAGRGLHRLQQAGIAVHHGVLMEQAEKINRGFLKRMRTGFPYVQLKLGASL
DGRTAMASGESQWITSPQSRQDVQRFRAQSSAILSSSATVLADDPSLTVRWSELDEDTQRLYPESAMRQPVRVIVDSQSR
VTPQHCLVNQPGQTWLARARQDDQSWPDGVEQLEMPLHGGGIDLVGLMMTLGKRQINTVWVEAGPRLAGALLQAGVVDEL
IVYLAPKLLGDAARSLCVLPGLEQLSQAPMFDMTDVCQIGPDVRLTLKPR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00289 YP_008207754.1 Pyrimidine deaminase Not tested AbaR25 Protein 8e-66 50
BJAB0868_00293 YP_008211619.1 Pyrimidine deaminase Not tested AbaR26 Protein 8e-66 50