Gene Information

Name : Dd1591_2807 (Dd1591_2807)
Accession : YP_003005110.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3516
EC number : -
Position : 3190427 - 3190930 bp
Length : 504 bp
Strand : -
Note : TIGRFAM: type VI secretion protein, VC_A0107 family; PFAM: conserved hypothetical protein; KEGG: eca:ECA3445 hypothetical protein

DNA sequence : 
ATGGCAAAAGGAACTGACGGTGCATCTGTCGCACCAAAGGAACGTATTAATATCAAATATGTCCCAGCTACGGGTGGTCA
GCAGGCGGAAATTGAATTACCGCTGACGTTGATGGTAGTGGGAAATATGAAGGGACGCACAGAAGAGACACCGATTGAAG
AACGTCAGACGGTGTCTATCGACAAGAACAATTTCACTTCGGTCATGAAAGAGGCCAATCTGGAGCTGAATTTCAGCGTG
CCTAACCGCCTGGAAGAAGACAGCCAGGATGACCTCCCCGTCAAACTCAGTATCGCTTCACTGAATGATTTCTCCCCCGA
TCGCATCGCCCAGCAAGTACCGGAACTGCGCAAGCTGCTGGAACTGCGCGAAGCGCTGGTGGCGCTGAAAGGGCCGCTGG
GTAATATCCCCGCTTTCCGCAATCGCCTGCAGGATCTGTTATCCAGCGAAGAAGCCAGAGAGCAGTTGCTTAAAGAGCTG
GATCTGGTGAAACCCGCCGAATAA

Protein sequence : 
MAKGTDGASVAPKERINIKYVPATGGQQAEIELPLTLMVVGNMKGRTEETPIEERQTVSIDKNNFTSVMKEANLELNFSV
PNRLEEDSQDDLPVKLSIASLNDFSPDRIAQQVPELRKLLELREALVALKGPLGNIPAFRNRLQDLLSSEEAREQLLKEL
DLVKPAE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
HH0248 NP_859779.1 hypothetical protein Not tested HHGI1 Protein 2e-26 54
aec17 YP_851427.1 hypothetical protein Not tested PAI II APEC-O1 Protein 5e-34 52
aec17 AAQ96711.1 Aec17 Not tested AGI-1 Protein 3e-34 52

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_2807 YP_003005110.1 type VI secretion protein VFG2092 Protein 7e-41 64
Dd1591_2807 YP_003005110.1 type VI secretion protein VFG2474 Protein 8e-31 51