Gene Information

Name : Dd1591_2806 (Dd1591_2806)
Accession : YP_003005109.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : EvpB/VC_A0108 family type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3517
EC number : -
Position : 3188917 - 3190395 bp
Length : 1479 bp
Strand : -
Note : TIGRFAM: type VI secretion protein, EvpB/VC_A0108 family; PFAM: protein of unknown function DUF877; KEGG: eca:ECA3444 hypothetical protein

DNA sequence :
ATGTCAATGGTTGAAGAACAGGCCCAGACAAGCGCGGCCGGTGGTTCATCATCGCTGCTTGAAGAAATCATGGCGCAGGC
GCGCATCACCCCGGTGGATGAAGGTTACAACGTCGCCAAACAGGGGATCGCCGCGCTGGTGGCGAACATTCTGGACAGCG
GCAACGCGGCCGAGCCGGTGAACAAGGCGCTGGTCGACAGCATGATCGTTGAGCTGGACAAAAAACTCAGCAAACAGATC
GACGTGATTCTTCATGCACAGGAGTTGCAGGAGCTGGAATCTTCCTGGCGCTCACTGAAACTGCTGATCGATCGCACCGA
TTTCCGTGAAAACATCAAAATCCTGCTGCTGCACGCGACCAAAAACGAGCTGCTGGAAGACTTTGAGTTTGCACCGGAAA
TTACCCAGTCCGGTTTCTATAAACACGTTTATTCCAGCGGCTACGGCCAGTTCGGCGGCCAGCCGATCGGCGGGGTGATC
GGCGATTACGCGCTGACTCAAAGCTCGCCGGACATCAAGCTGATGCAGTATGTCAGCGCGGTGGGCGCGATGGCGCACGC
ACCGTTCATCTCCTCCGTCGCACCGACCTTCTTCGGTGTGGACAGCTTTACCGATCTGCCGTCGATCAAAGACCTGAAAT
CGGTATTCGAAGGCCCGGCTTACACCAAATGGCGTTCGATGCGCGAATCGGAAGATGCCCGCTATCTGGGGCTGACGGCG
CCGCGTTTCCTGGCTCGCCTGCCGTATGACCCGGTAGAAAACCCCATCAAAGGGTTTCACTACAAGGAAGACATCAGCGC
CAACCACGAACACTACCTGTGGGGCAACACCGCGTATCTGATGGGGACCGCCATCACCGACAGCTTCGCCAAGTACCGCT
GGTGCCCGAACATTATCGGCCCGCAAAGCGGCGGCGCCATCACCGATCTGCCGGTGCATGTGTATGAAGCGATGGGCCAG
TTGCAGGCCAAGATTCCGACCGAGGTGTTGATCACCGACCGTCGCGAATACGAAATGGCCGAAGAGGGTTTCATCACCCT
GACCATGCGTAAAGACAGCGATAACGCCGCGTTCTTCTCCGCCAACTCGGTGCAGAAACCCAAGGTGTTCGCCAATACCA
AAGAAGGGAAAGAGGCGGAAACCAACTACAAACTGGGTACGCAACTGCCGTACATGTTCATCATCAACCGCCTGGCGCAC
TACATCAAAGTGTTGCAGCGCGAGCAAATCGGTTCCTGGAAAGAGCGTCAGGATCTGGAGCGCGAGCTGAATAACTGGAT
CAAGCAGTACGTCGCCGATCAGGAAAACCCGCCGGCTGATGTACGCAGCCGCCGTCCGCTGCGTGCGGCACAGATCAAAG
TGCTGGATGTGGAAGGCGAACCGGGCTGGTATCAGGTGACCATGGCGGTGCGCCCGCACTTCAAGTACATGGGGGCGAAC
TTTGAATTGTCCCTGGTTGGTCGTCTGGATAAGGAATAA

Protein sequence :
MSMVEEQAQTSAAGGSSSLLEEIMAQARITPVDEGYNVAKQGIAALVANILDSGNAAEPVNKALVDSMIVELDKKLSKQI
DVILHAQELQELESSWRSLKLLIDRTDFRENIKILLLHATKNELLEDFEFAPEITQSGFYKHVYSSGYGQFGGQPIGGVI
GDYALTQSSPDIKLMQYVSAVGAMAHAPFISSVAPTFFGVDSFTDLPSIKDLKSVFEGPAYTKWRSMRESEDARYLGLTA
PRFLARLPYDPVENPIKGFHYKEDISANHEHYLWGNTAYLMGTAITDSFAKYRWCPNIIGPQSGGAITDLPVHVYEAMGQ
LQAKIPTEVLITDRREYEMAEEGFITLTMRKDSDNAAFFSANSVQKPKVFANTKEGKEAETNYKLGTQLPYMFIINRLAH
YIKVLQREQIGSWKERQDLERELNNWIKQYVADQENPPADVRSRRPLRAAQIKVLDVEGEPGWYQVTMAVRPHFKYMGAN
FELSLVGRLDKE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec18 AAQ96712.1 Aec18 Not tested AGI-1 Protein 6e-170 70
aec18 YP_851426.1 hypothetical protein Not tested PAI II APEC-O1 Protein 8e-170 70
HH0247 NP_859778.1 hypothetical protein Not tested HHGI1 Protein 2e-146 59

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_2806 YP_003005109.1 EvpB/VC_A0108 family type VI secretion protein VFG2093 Protein 0.0 77
Dd1591_2806 YP_003005109.1 EvpB/VC_A0108 family type VI secretion protein VFG2475 Protein 1e-153 61