Gene Information

Name : Dd1591_2800 (Dd1591_2800)
Accession : YP_003005103.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : type VI secretion protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3522
EC number : -
Position : 3182625 - 3183962 bp
Length : 1338 bp
Strand : -
Note : TIGRFAM: type VI secretion protein, VC_A0114 family; PFAM: protein of unknown function DUF876; KEGG: eca:ECA3438 hypothetical protein

DNA sequence :
ATGTCGAGCCGAAATCGGATTATTTGGCGGGAAGGGCTGTTCATCAAGCCGCAGCATTTCCAGCAACAGCAAAGACACAC
GGACTACGCGCTCCATGCCCGTCTTAGCGCGCTTAGCGACTATTTCTACGGCCTGCAATCGCTGGCAATCAACGAGGAAT
ACCTCAACTTCGGGCGTATCGCGCTGGTGAACGCCACCGGCGTGATGCCGGACGGCACGGTCTTCAACATTCCGGGGGAT
GACGCGCTGCCGCAACCGCTGGAGATTACCGATGTGGCGCTGGCGAACCAGAAGGTCTATCTGGCACTGCCGCTGGCGGT
GAACGGTGTGAGCGAAGTCGGGCAGGCCGGGGCCGGTATTGCCACCCGTCTGCAATCGCATCGTCACGATGTGCGCGATT
TGCACAGCGAAGGCGGCGACGTGGTGTCGATGGAAGTGGGCAAGGTCAGCCTGCGGCTGATGCTGGAACGCGATGATCGC
AGCGCTTATGCGTCGCTGGCGATCGCCAACATCCTCGACAAACGGCCGGACGGCGGGCTGGTGCTGGACCCTAACTTTAT
GCCTTGCAGCATCAGCGTTACCGCCATTGCGAGCCTGAAACGCTTTCTGGGGGAATCCGCCGGTCTGGTGGCGGAACGCG
CCCGCAGCCTGGCCCAGCGCATCGCCGCGCCCGGTCAGCAAGGGGTGGCGGACGTGGCGGAATTCATGATGCTGCAACTG
CTTAACCGCGCCCAGCCGCAGCTGTCGCATCTGGCGCGTCTCGGTACGCTGCACCCGGAGCGGCTGCACGAAGCGCTGGT
GCAACTGTGCGGCGAACTGATGACCTTTACCGACGAGTCGCGCCTGCCGCCGGAGTTTCCCGCTTACCGGCACGAGCATC
AGCAAGCGAGCTTCGAGCCGCTGATGATGGCGCTGCGTCAGGCGCTGAGCACCGTGCTGTCGCCGCGTGCGGTGTCGATC
CAGATGAAAGCGCAGCCTTACGGCGTGCGGGTGGCGCTGGTGGGCGATGCCGAACTGATGGCCGGCGCCGAATTTGTGCT
GGCGGTGCGCGCGCGTATGCCGCAGGAGCATCTGCGCAAGCAACTGCTGCAACAAACCAAGATCGCCTCCAGCGACAAAA
TTCGCGAACTCATCAGCCTGCAACTGCCCGGCGTGCCGCTGCTGCCGCTGCCGGTGGCGCCGCGCCAGCTGCCGTATCAC
GCCGGCTACAGCTACTTCCAGTTGGACAGGCAAAGCCCGGCCTGGAAATCACTGGTCACCAGCAACACGCTGGCGTTCCA
CATTGCCGGCGAATTCCCGGAACTGGACATGCAACTGTGGGCCATCCGCGGCCAGTAG

Protein sequence :
MSSRNRIIWREGLFIKPQHFQQQQRHTDYALHARLSALSDYFYGLQSLAINEEYLNFGRIALVNATGVMPDGTVFNIPGD
DALPQPLEITDVALANQKVYLALPLAVNGVSEVGQAGAGIATRLQSHRHDVRDLHSEGGDVVSMEVGKVSLRLMLERDDR
SAYASLAIANILDKRPDGGLVLDPNFMPCSISVTAIASLKRFLGESAGLVAERARSLAQRIAAPGQQGVADVAEFMMLQL
LNRAQPQLSHLARLGTLHPERLHEALVQLCGELMTFTDESRLPPEFPAYRHEHQQASFEPLMMALRQALSTVLSPRAVSI
QMKAQPYGVRVALVGDAELMAGAEFVLAVRARMPQEHLRKQLLQQTKIASSDKIRELISLQLPGVPLLPLPVAPRQLPYH
AGYSYFQLDRQSPAWKSLVTSNTLAFHIAGEFPELDMQLWAIRGQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec25 YP_851420.1 hypothetical protein Not tested PAI II APEC-O1 Protein 7e-90 46
aec25 AAQ96719.1 Aec25 Not tested AGI-1 Protein 5e-90 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_2800 YP_003005103.1 type VI secretion protein VFG2082 Protein 2e-128 60
Dd1591_2800 YP_003005103.1 type VI secretion protein VFG2065 Protein 2e-88 44