Gene Information

Name : Dd1591_2798 (Dd1591_2798)
Accession : YP_003005101.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : type VI secretion ATPase, ClpV1 family
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG0542
EC number : -
Position : 3179198 - 3181816 bp
Length : 2619 bp
Strand : -
Note : KEGG: eca:ECA3436 putative chaperone; TIGRFAM: type VI secretion ATPase, ClpV1 family; PFAM: ATPase AAA-2 domain protein; AAA ATPase central domain protein; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase

DNA sequence :
GTGATTCGAATCGAACTGCCGATCCTGGTTGAGCGACTCAACCCGCTGTGCCGCCACATGATGGAAGAAGCGGCGGCGCT
GTGTATTCAGCATCAGGGCGCGGAGATCCGCATTGAGCACCTGTTGCTGAAAATGCTGGAAACGCCGTTGTGCGACGTGC
GCCTGATCCTCAAACGCGCCGGGGTAGAGGCCGACGAACTGGCGGCCCTGTTGCAGCCCAATGCCGCAGACAAAGGGTTT
GAGTCGGGCTATCCCTCGTTTTCGCCGCTGCTGGTGGAGTGGTTACAGGACAGCTGGCTGCTGGCCTCGGCCGAACTCCA
GCACGCCCGCCTGCGTAGCGGCGTGCTGCTGCTGGTGTTACTGATGACGCCGACGCGTTATCTGTCGGCCACGGTAACCC
GCCAATTGGCGCAAATTAACCGTGAGCTGCTGCGCCAGCAGTTTGACGAGTGGGTGAAAGACTCGGCGGAAACCGAGGTG
GTGACCGCCACAGGCGTCGCACCGGAGCAGGCCGCCGCCGCGACCACCCAACTGTCCCGCTATACCCAGAATGTCACCGA
GTCGGCCCGTCAGGGCAAGCTGGACCCGGTGTTATGCCGTGATCACGAAATTGACCTGATGATCGATATCCTCTCCCGCC
GTCGTAAAAATAACCCGATCGTGGTCGGTGAGGCCGGGGTAGGGAAAAGCGCGCTGATTGAAGGGCTGGCGCTGCGTATC
GTCGCGGGTCTGGTGCCGGAACGGCTGCGGGATGTGGAATTGCTGACGCTGGATTTAGGTGCCATGCAGGCCGGTGCGTC
GGTGAAAGGCGAGTTCGAGAAGCGCTTTAAAGGGGTGATGCAGGAAGTCAAAGAGGCACCGAAGCCGATTGTCCTGTTTA
TTGACGAGGCGCACACACTGATTGGTGCGGGTAATCAGGCCGGGGGGCTGGATGTGTCCAACCTGCTGAAACCGGCGCTG
GCTCGGGGTGAGTTGCGCACCATCGCGGCGACCACCTGGAGCGAGTACAAGAAATACGTGGAAAAAGACGCCGCGCTGTC
ACGCCGCTTCCAACTGGTGAAGGTGGGGGAGCCGAACGTCGAACAAGCCACGGTGATCCTGCGTGGGCTGCGCAGCATTT
ACGAACAGTCACACGGCGTGTTGATTGACGAAGAAGCCTTGCAGGCGGCGGCCAATTTGTCTGCGCGCTATATCTCCGGG
CGTCAGTTGCCGGATAAAGCTATCGACGTGCTGGACACCGCCTGTGCGCGTGTCGCCATCAATCTGACCACACCACCGCG
TGCGGTCAGCCAGTTGCAGACCCGTCTGCACCAACAGGCGCTGGAAATCGCCCAGTTGGAGCGTCAAGGCCGCATTGGCC
TGGGGGATACAGAGGAGCGGCTGGTCACGCTGCGTGAGGCTCGTGAAACCGACGCCGCGACACTGGCGCAACTGGAAGCC
GACTGGCAGCGGCAAAAAACGCTGGTGCAGCAGATCGTCGCCCTGCGTACCGCCCTGCTGGCTGATGAACCGGCGGCAGA
TTTCGATGCCGCCGCGGCCGCCGCCGAGCTGGCCGACAGCGAGCGGGCGCTGGCCGAACTGCAACAACCGTCGGTGCTGG
TATCGCCGCATGTGGATAAAACCCAGATTGCCTCGGTGATTGCCGAGTGGACCGGCGTACCGCTGAACCGTATTTCCCAG
GGCGAGCTGGATGTGGTCACCCGCCTGCCGGATTACCTCGGCGACAGCATCAAAGGGCAGCAACTGGCGATCGCCCAGTT
GCACAAACACCTGCTGACCGCCCGTGCCGACCTGCGCCGTCCCGGTCGCCCGCTGGGCGCGTTTTTACTGGTGGGGCCGA
GCGGCGTGGGTAAAACCGAAACCGTGGTGCAGATTGCCGACCTGATGTTCGGCGGTCGTCATTATCTCACCACCATCAAC
ATGTCCGAGTACCAGGAGAAGCACACGGTTTCCCGCCTGATTGGTTCGCCGCCGGGCTATGTCGGCTTTGGCGAAGGCGG
GGTGCTGACCGAAGCCATTCGCCAGAAACCCTATTCGGTGGTGTTGCTGGATGAAGTGGAGAAAGCCCACCCGGATGTCC
TCAACCTGTTCTATCAGGCGTTTGATAAAGGCGAACTGGCCGATGGCGAAGGGCGGCTGATCGACTGTCGCAACGTGGTG
TTCTTCCTGACCTCTAACCTCGGGTTCCAGACGATTGTCAATTTTGTGGAGCGCGTCAATTTTGCGGATCGGCAGGATGA
ACTGCTGGATGCGCTCTACCCGGAACTGGCGGCGTTCTTCAAACCGGCGTTGCTGGCGCGCATGGAAGTAATCCCATACC
TGCCGCTGGACTACGACACGCTGGTTGAGATCGTACAGGGCAAGCTGTCCCGTCTGGTGACGTTGCTACAACAGCGCTTT
GGTGCCGAGGTCGTCATCGACGCGACGGTGCCGGAAGAGATTTTGCGTCTGGCGAACCGCAGCGAGAACGGCGCACGCAT
GTTGGAGTCGGTTATCGACGGCGCGTTGTTGCCGCCGGTGTCGTTGCAGTTGTTGCAACGCTTGTCGGCCGGCCAGCCGG
TCAGCCGTATTCATTTCCAGGTGGAAGACGGCCAGTTCCGGTCCGAGGTGGAGGGCTGA

Protein sequence :
MIRIELPILVERLNPLCRHMMEEAAALCIQHQGAEIRIEHLLLKMLETPLCDVRLILKRAGVEADELAALLQPNAADKGF
ESGYPSFSPLLVEWLQDSWLLASAELQHARLRSGVLLLVLLMTPTRYLSATVTRQLAQINRELLRQQFDEWVKDSAETEV
VTATGVAPEQAAAATTQLSRYTQNVTESARQGKLDPVLCRDHEIDLMIDILSRRRKNNPIVVGEAGVGKSALIEGLALRI
VAGLVPERLRDVELLTLDLGAMQAGASVKGEFEKRFKGVMQEVKEAPKPIVLFIDEAHTLIGAGNQAGGLDVSNLLKPAL
ARGELRTIAATTWSEYKKYVEKDAALSRRFQLVKVGEPNVEQATVILRGLRSIYEQSHGVLIDEEALQAAANLSARYISG
RQLPDKAIDVLDTACARVAINLTTPPRAVSQLQTRLHQQALEIAQLERQGRIGLGDTEERLVTLREARETDAATLAQLEA
DWQRQKTLVQQIVALRTALLADEPAADFDAAAAAAELADSERALAELQQPSVLVSPHVDKTQIASVIAEWTGVPLNRISQ
GELDVVTRLPDYLGDSIKGQQLAIAQLHKHLLTARADLRRPGRPLGAFLLVGPSGVGKTETVVQIADLMFGGRHYLTTIN
MSEYQEKHTVSRLIGSPPGYVGFGEGGVLTEAIRQKPYSVVLLDEVEKAHPDVLNLFYQAFDKGELADGEGRLIDCRNVV
FFLTSNLGFQTIVNFVERVNFADRQDELLDALYPELAAFFKPALLARMEVIPYLPLDYDTLVEIVQGKLSRLVTLLQQRF
GAEVVIDATVPEEILRLANRSENGARMLESVIDGALLPPVSLQLLQRLSAGQPVSRIHFQVEDGQFRSEVEG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY0294 NP_454876.1 ClpB-like protein Not tested SPI-6 Protein 3e-127 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_2798 YP_003005101.1 type VI secretion ATPase, ClpV1 family VFG2084 Protein 0.0 61