Gene Information

Name : Dd1591_2669 (Dd1591_2669)
Accession : YP_003004976.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : transport system permease protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 3027906 - 3028928 bp
Length : 1023 bp
Strand : -
Note : PFAM: transport system permease protein; KEGG: sgl:SGP1_0037 achromobactin ABC transporter permease component CbrB

DNA sequence :
ATGAGTCACGCCGTGATACCGGTTGGGAAGCGGAGAGCGCCCGGCCAGGTGCTGGCGGGCGGCGGCGTCTGTCTGCTGGC
GCTGGCTTTTCTTAGCCTGATGGTCGGGCCGATAGGGATTGCGCCGTCGCAGGCGCTGGGCGCGCTATGGCACCCGGACC
CGCTTAACGTTAACCATATTCTGGTCACCTCGACCCGCCTGTCGCGCACGTTGGTAGCCGTCGTGGTGGGGGGGAGTCTG
GCGGTGGCGGGTGCCTTGATGCAGGTGTTGACCCGTAACCCGCTGGCGTCGCCGGGGTTGTTCGGCATCAACGCCGGCGC
GATGTTTTTTTTGATCGTCTGTGTGTCGCTGTTTCCCAACGTGGCGATGTCGGTGTGGCTGTGGTCGGCATTTGCCGGTG
CGGCGGTGGCCGGTTGTCTGGTGTGGCTGATCGGCACCATGGGCAAGGGTAGCCTTAACCCGTTGCGTATGGTGCTGGCG
GGCGCGGCCATCACCGCCATGTTCGCCGCCTTCAGTCAGGCGATGCTGGTGGTGAATCAGGAAGGGCTGGATACGGTGCT
GTTCTGGCTGGCGGGATCGGTGGCCGACCGTGAGCTGGCGACGGTGCTGCCGCTGATGGGCTACTGCCTGACGGCGCTGG
TCGGTGCGTTGCTGCTGTCGGGGCAGGTCAACGTGCTGAACGCCGGTGAGGCCATTGCCCGCGGGCTGGGGCAGCGTACC
GGGCGCATCCGGCTGCTGATGAGCCTGCTTGTCGTCGCGTTGGCCGGCGGCGCGGTGGCGATGGCGGGCAGCATTGGTTT
TGTCGGGCTGATTGTGCCGCACATGGCCCGAAAACTGTTGCCCGCCGACCACCGCTGGCTGCTGCCCGGTTGCGCACTGC
TGGGGGCGTGTCTGCTGCTGTTGGCGGATATTCTGGCGCGGGTAGTGATTGTGCCGCAGGAAGTGCCGGTCGGCGTGATG
ACCGCGCTGTTCGGCGCGCCGTTCTTCCTGTTCCTGCTGCGTCGCGGAGGCCGTCATGGATAA

Protein sequence :
MSHAVIPVGKRRAPGQVLAGGGVCLLALAFLSLMVGPIGIAPSQALGALWHPDPLNVNHILVTSTRLSRTLVAVVVGGSL
AVAGALMQVLTRNPLASPGLFGINAGAMFFLIVCVSLFPNVAMSVWLWSAFAGAAVAGCLVWLIGTMGKGSLNPLRMVLA
GAAITAMFAAFSQAMLVVNQEGLDTVLFWLAGSVADRELATVLPLMGYCLTALVGALLLSGQVNVLNAGEAIARGLGQRT
GRIRLLMSLLVVALAGGAVAMAGSIGFVGLIVPHMARKLLPADHRWLLPGCALLGACLLLLADILARVVIVPQEVPVGVM
TALFGAPFFLFLLRRGGRHG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-11 41
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-11 41
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-11 41
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-11 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_2669 YP_003004976.1 transport system permease protein VFG0926 Protein 1e-20 42