Gene Information

Name : Dd1591_2603 (Dd1591_2603)
Accession : YP_003004915.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : ABC transporter
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG1108
EC number : -
Position : 2953439 - 2954266 bp
Length : 828 bp
Strand : +
Note : PFAM: ABC-3 protein; KEGG: plu:plu2675 chelated iron transport system membrane protein YfeD-like protein

DNA sequence : 
ATGGAATGGTTAACCCTGCTCGTCGAACCGTTTTCCTTTCCGTTCATGGTTAAAGCCATGCTGGCGGCGGGCGTGGTCGG
CATGGTGTGTGCGGTGCTCTCTTGTTTTATGGTGCTCAAAGGCTGGTCGCTGATGGGCGACGCCGTTTCCCACGCCGTGC
TGCCCGGCGTGGTGCTGGCCTGGCTGGCGGGCATCCCGCTGGCGATCGGCGCGTTCGCCTCCGGTCTGTTTTGCGCGCTG
GCGACCGGCTATGTGAAGGAGCGTTGCCGCATCAAAGAAGACACGGTGATGGGGATTCTGTTTTCCGGCATGTTCGCCGT
CGGCTTGGTGCTGTTCTCGCGCGTCAATACCGAACAGCATCTGAGTCATATCCTGTTCGGCAACGTACTGGGCATCACCC
GCTATGAACTGCAACAAACGTTGGTGATCAGCCTGCTGGTGCTGGCCGTGGTTATCATCAAATGGCGCGATCTGGTGTTG
TACTGTTTTGATGCCACGCAAGCGCAAATCTGCGGTCTGCCGGTAAAACTGCTGCACTATGGCTTGCTGACCCTGCTGTC
GCTGACCATCGTCGCCGCGTTGCAGGCGGTCGGCGTGATTCTGGTGATCGCCATGTTGATTACCCCCGGCATTACCGGAT
TTGTGTTGTGCAAACGCTTCGGCTCCATGATGCTGGTGGCGGTAGCCGCTGCGACATTCTCTTCGGTTTTCGGCACCTGG
CTCAGCTATTTCCTCGATGGTGCGACCGGGCCGTGCATCGTGATTATCCAGTCGCTGATTTTTCTCATCGCGCAGTGCGT
GGCGAAAATACGAAAACCGCAGCGCTGA

Protein sequence : 
MEWLTLLVEPFSFPFMVKAMLAAGVVGMVCAVLSCFMVLKGWSLMGDAVSHAVLPGVVLAWLAGIPLAIGAFASGLFCAL
ATGYVKERCRIKEDTVMGILFSGMFAVGLVLFSRVNTEQHLSHILFGNVLGITRYELQQTLVISLLVLAVVIIKWRDLVL
YCFDATQAQICGLPVKLLHYGLLTLLSLTIVAALQAVGVILVIAMLITPGITGFVLCKRFGSMMLVAVAAATFSSVFGTW
LSYFLDGATGPCIVIIQSLIFLIAQCVAKIRKPQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitD NP_461785.1 permease Virulence SPI-1 Protein 2e-57 53
sitD AAD41068.1 SitD Virulence centisome 63 pathogenicity island Protein 1e-57 53
sitD YP_217784.1 iron transporter: fur regulated Virulence SPI-1 Protein 2e-57 53
sitD NP_457258.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 3e-57 52
sitD NP_806467.1 iron transporter inner membrane protein Virulence SPI-1 Protein 3e-57 52
sitC AAD41067.1 SitC Virulence centisome 63 pathogenicity island Protein 1e-44 44
sitC NP_457257.1 Iron transport protein, inner membrane component Virulence SPI-1 Protein 1e-44 44
sitC NP_806466.1 iron transporter inner membrane protein Virulence SPI-1 Protein 1e-44 44
sitC YP_217783.1 iron transporter: fur regulated Virulence SPI-1 Protein 1e-44 44
sitC NP_461784.1 permease Virulence SPI-1 Protein 1e-44 44

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_2603 YP_003004915.1 ABC transporter BAC0442 Protein 3e-70 65
Dd1591_2603 YP_003004915.1 ABC transporter BAC0352 Protein 9e-58 53
Dd1591_2603 YP_003004915.1 ABC transporter BAC0441 Protein 9e-43 47
Dd1591_2603 YP_003004915.1 ABC transporter BAC0351 Protein 6e-45 44

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_2603 YP_003004915.1 ABC transporter VFG0528 Protein 8e-58 53
Dd1591_2603 YP_003004915.1 ABC transporter VFG0527 Protein 6e-45 44