Gene Information

Name : Dd1591_2600 (Dd1591_2600)
Accession : YP_003004912.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : periplasmic solute binding protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0803
EC number : -
Position : 2950744 - 2951694 bp
Length : 951 bp
Strand : +
Note : PFAM: periplasmic solute binding protein; KEGG: spe:Spro_2133 periplasmic solute binding protein

DNA sequence : 
ATGTTTACGGCCTTTCAGGGTTCTTTGAAAACGATGCGCAAAACGCGATTATCCTTCCCTTTGTCTTTTTCAGGCGCTGC
GCTGTTCGCCGCCCTGCTGGCGTCACTGTTCGCTTTTTCGCTACCGGCGACGGCAAAACTCAAGGTGGTGACCACCTTTA
CCATTATTCAGGATATCGCCCAACATGTTGCCGGCGATGCCGCCACCGTTGAATCGATCACCAAGCCGGGTGCGGAAATC
CACGATTACCAACCCACGCCACGGGATATCGCCAAAACGCAGTCGGCAAACCTGATTCTGTGGAATGGCCTTAATCTGGA
GCGCTGGTTCGGCCGGTTCTTTGAAAACATTCAGGGCGTACCTTCCGTGGTCGTCAGCGAAGGCGTCACGCCCATCGCGA
TCAACGAAGGCCCTTACAACGGCAACCCGAATCCCCACGCCTGGATGTCACCAAACAACGCTTTAATTTATATAGAGAAT
ATCCGGGCAGCGCTGGTGAAATACGACCCGGACAACGCGGAAACCTATAACCGTAACGCCAAAAATTACGCCGCGCAGAT
TATGGCGCTGGATCAACCGCTGCGCGCACGGCTGAATAATATCCCGGCCGAACACCGCTGGCTGGTCACCAGCGAAGGCG
CCTTCAGCTATCTGGCGCGCGACTATGGCCTGAAAGAACTGTACCTGTGGCCGATCAACGCCGACGAGCAAGGCACGCCG
CAGCAGGTGCGTCATGTGATTGACGCCGTGCGCCGGCACCAGATCCCGGTCGTGTTCAGCGAAAGCACCGTATCGGATAA
ACCGGCGCGCCAGATAGGCAAAGAAACCGGCGCGCGCTATGGCGGCGTGCTGTATGTGGATTCGCTGTCAACCAAAGACG
GCCCGGTTCCCGACTATATTTCCCTGTTAAACACCACCGTCGACACCATTGCAAAAGGCTTTAACCAATGA

Protein sequence : 
MFTAFQGSLKTMRKTRLSFPLSFSGAALFAALLASLFAFSLPATAKLKVVTTFTIIQDIAQHVAGDAATVESITKPGAEI
HDYQPTPRDIAKTQSANLILWNGLNLERWFGRFFENIQGVPSVVVSEGVTPIAINEGPYNGNPNPHAWMSPNNALIYIEN
IRAALVKYDPDNAETYNRNAKNYAAQIMALDQPLRARLNNIPAEHRWLVTSEGAFSYLARDYGLKELYLWPINADEQGTP
QQVRHVIDAVRRHQIPVVFSESTVSDKPARQIGKETGARYGGVLYVDSLSTKDGPVPDYISLLNTTVDTIAKGFNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sitA NP_457255.1 Iron transport protein, periplasmic-binding protein Virulence SPI-1 Protein 6e-97 69
sitA NP_806464.1 iron transporter periplasmic-binding protein Virulence SPI-1 Protein 6e-97 69
sitA NP_461782.1 periplasmic binding protein Virulence SPI-1 Protein 6e-97 69
sitA AAD41065.1 SitA Virulence centisome 63 pathogenicity island Protein 4e-97 69
sitA YP_217781.1 iron transporter: fur regulated Virulence SPI-1 Protein 6e-97 69

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_2600 YP_003004912.1 periplasmic solute binding protein BAC0439 Protein 3e-104 77
Dd1591_2600 YP_003004912.1 periplasmic solute binding protein BAC0349 Protein 3e-97 69

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_2600 YP_003004912.1 periplasmic solute binding protein VFG0525 Protein 2e-97 69