Gene Information

Name : Dd1591_2559 (Dd1591_2559)
Accession : YP_003004878.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Unknown
Product : type VI secretion system Vgr family protein
Function : -
COG functional category : S : Function unknown
COG ID : COG3501
EC number : -
Position : 2919149 - 2921005 bp
Length : 1857 bp
Strand : +
Note : TIGRFAM: type VI secretion system Vgr family protein; Rhs element Vgr protein; PFAM: Rhs element Vgr protein; KEGG: eca:ECA2867 putative rhs accessory genetic element

DNA sequence :
GTGGCCAACAGTACAGGATTGCAGTTTACCGTCAAAATCGGCGCATTGGCGGACACCACCTTCGCGGTGGTGGATTTTGA
ACTCAGCGAGGCGCTGAACCAGCCGTTTGCGCTGTCGCTGAGCCTTGCCAGCAGTCAGGCCGATATCGACTTCGGCGCGG
TGCTGGACCAGCCGTGCGAATTGATGGTGTGGTACGAAGGCGAATTGCAGCGCCGAGTCAGCGGTATCGTCAGCCGCTTT
GCCCAGGGCGACACCGGCTTTCGTCGCACCCGTTATCAGGCCGAGGTGCGCCCGGCGCTGTGGCGGCTCGGTCTGCGCAC
CAACGCCCGTATTTTCCAGACCAAAAAACCGGATGAGATTATCACCGAACTGTTGCAGGAAGCCGGTATCAGCGACTTTG
CCTTTGCCCTGCGCCATGACCACGCCGTCCGTGAATACTGCGTGCAGTACCGCGAAAGCGACCTGGCGTTCATCAACCGG
CTGGCTGCAGAAGAAGGGATGTTCTACTACCACGAGTTTGAAACCGGTAAGCACCGGGTGGTGTTTGCCGATGACGCCGG
TGCGCTCAGCAAAGGCCCCGAGCTGTTCTTCAATCTCGCCACGCAGGGGCTGAGCGAAGGGGCGTATGTGCGCCGTTTCC
GCTACGCCGAAGCGGTGAGCACCGCTGCGGTGGAACTGAAGGATTACAGCTTCAAAACCCCGGCGTATGGCCTGTCGCAC
AAGAAAACCAGCAACGAGCTGGCGCACCAGCGCGAATCCTACCAGCACTTTGATTACCCCGGCCGCTTCAAACTGGACCC
GAGCGGCAAGGCGTTTACCGGCTACCGGCTGGATGCGCTGCGTGCCGGGGCGATGACCGGGGCGGGTGAATCCAACGCCG
CCGAACTGAGGCCGGGCAGCACCTTTACCCTCACCGAGCACCCGAACCCGGCGTTTAACCTGGCCTGGCAGGTGGTGGCG
GTGACCCACAGCGGGCAGCAGCCGCAGGCGCTGGAAGAGGAAAGCGGCGGCGAGCCGACCACCATCAGCAACAGTTTCGA
GGTGGTGAAAGCCACCACCACCTGGCGGGCGGCCATGCCGTACAAGCCGATGGTGGACGGCCCGCAGATTGCCACCGTGG
TCGGCCCGGCGGGCGAAGAGATTTACTGCGACGAGTTTGGCCGGGTGAAGCTGCAGTTCCCGTGGGACCGCTACGGTGCC
AGCGACGACCAGAGCTCCTGCTGGGTGCGGGTCAGTCAGGGCTGGGCCGGTGGCCAGTACGGCTTGATTGCCATTCCGCG
CATCGGCCATGAAGTGGTGGTGAGTTTCCTGGAAGGCGACCCGGACCAGCCGATCATCACCGGTCGCACCTTTCACGCCA
CCAATCCTTCGCCGTATCCGCTACCGGCTAACAAAACCCGCACCTCGCTGCGCACCAGTACCCATAAAGGGGCCGGGTTC
AACGAACTGCGCTTTGAAGACCAGGCCGGGCAGGAAGAGGTGTTTATCCACGCCCAGAAGGACATGAATACGGTGGTGCT
GAATAACCGCAGCACGGCGGTCAACGCCAGCCACACCGAGAATGTCGGTGGCGACCAGACGGTGGTGGTGCAGCACAACC
AGACGTTTAGCATCGAGCAAAACCAGAATACTGGGATAAAAGGTGCTCAGATTATCAGCGTGGGTAATGGACGCCAGACC
AGCGTGACAACAACCGATACCTTGACGGTCAGCGGCGATGTGACAGTTGTGTCAACGGGAGGGAACATTAAACTGTCTAC
TGCGGGTGGATATATTTCCATCGATCACACTGGTGATATTAGCATTGTGGGCAATCATCTGATGCTAAATGGTGTAAGAA
TCGATCTAAACCAGTAA

Protein sequence :
MANSTGLQFTVKIGALADTTFAVVDFELSEALNQPFALSLSLASSQADIDFGAVLDQPCELMVWYEGELQRRVSGIVSRF
AQGDTGFRRTRYQAEVRPALWRLGLRTNARIFQTKKPDEIITELLQEAGISDFAFALRHDHAVREYCVQYRESDLAFINR
LAAEEGMFYYHEFETGKHRVVFADDAGALSKGPELFFNLATQGLSEGAYVRRFRYAEAVSTAAVELKDYSFKTPAYGLSH
KKTSNELAHQRESYQHFDYPGRFKLDPSGKAFTGYRLDALRAGAMTGAGESNAAELRPGSTFTLTEHPNPAFNLAWQVVA
VTHSGQQPQALEEESGGEPTTISNSFEVVKATTTWRAAMPYKPMVDGPQIATVVGPAGEEIYCDEFGRVKLQFPWDRYGA
SDDQSSCWVRVSQGWAGGQYGLIAIPRIGHEVVVSFLEGDPDQPIITGRTFHATNPSPYPLPANKTRTSLRTSTHKGAGF
NELRFEDQAGQEEVFIHAQKDMNTVVLNNRSTAVNASHTENVGGDQTVVVQHNQTFSIEQNQNTGIKGAQIISVGNGRQT
SVTTTDTLTVSGDVTVVSTGGNIKLSTAGGYISIDHTGDISIVGNHLMLNGVRIDLNQ

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
vgrG AAN64196.1 VgrG Not tested macrophage toxin pathogenicity island Protein 4e-150 51
aec15 YP_851429.1 hypothetical protein Not tested PAI II APEC-O1 Protein 6e-123 46
aec15 AAQ96709.1 Aec15 Not tested AGI-1 Protein 4e-123 46