Gene Information

Name : Dd1591_2037 (Dd1591_2037)
Accession : YP_003004362.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : winged helix family two component transcriptional regulator
Function : -
COG functional category : T : Signal transduction mechanisms
COG ID : COG0745
EC number : -
Position : 2340351 - 2341034 bp
Length : 684 bp
Strand : +
Note : PFAM: response regulator receiver; transcriptional regulator domain protein; SMART: response regulator receiver; KEGG: eca:ECA0785 two component system response regulator

DNA sequence : 
ATGCGTGTTTTAGTGGTTGATGATGATTCCGCGCTGTGCCATTGGCTGGGTGCGAAGTTACATGCCCACGGACACTCTTG
CCGGCTGATCCACGATGGGGCGGAGGCATTACAGGCGATTGAACAGGAAGTGTATGATGTGGTGCTGCTGGATCGGATGC
TGCCCGGCATGGATGGTTTCAGCGTGTTGCGTGCGCTACAGGGGCGTCCGCATCCTCCTGTCATGCTGTTGTCCGCATTG
GATCGCGACGTCGACCGCGTCATGGGGCTGGAGCTCGGCGCGGAAGATTATCTCGGAAAACCCTTTAACCTTAATGAATT
GCGTCTGCGGCTGGATATTATCGTCGGGCGCGACAAACGTCGTCATGAACAACGCCAGGTGCTCACTTTCGCCGATCTGA
AAGTCGATTGCCTGCAACGTTCCGTCTGGCGCGGCGGCAAACGCATCGAACTGACGGATAAAGAAATCAAACTGTTGATG
ATCCTGATGGAACATCCCGGCAAGGTGATAAGCCGCACGCTGCTGCTGGAGCGGGTATGGGGTTATCAGTTTGATCCGCA
GACTAACCTTATCGACGTACACCTTTCCAAACTGCGCGCCAAGATTGATAAAGGCTTCTCGTTACCGCTGATCAAAACAT
TGCGTTCGGTAGGTTATTGCCTCGGCGAGATTGAGAAGAGGTAG

Protein sequence : 
MRVLVVDDDSALCHWLGAKLHAHGHSCRLIHDGAEALQAIEQEVYDVVLLDRMLPGMDGFSVLRALQGRPHPPVMLLSAL
DRDVDRVMGLELGAEDYLGKPFNLNELRLRLDIIVGRDKRRHEQRQVLTFADLKVDCLQRSVWRGGKRIELTDKEIKLLM
ILMEHPGKVISRTLLLERVWGYQFDPQTNLIDVHLSKLRAKIDKGFSLPLIKTLRSVGYCLGEIEKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
copR NP_460069.2 transcriptional regulatory protein YedW Not tested SPI-5 Protein 4e-33 41

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_2037 YP_003004362.1 winged helix family two component transcriptional regulator BAC0125 Protein 3e-43 44
Dd1591_2037 YP_003004362.1 winged helix family two component transcriptional regulator BAC0083 Protein 1e-36 43
Dd1591_2037 YP_003004362.1 winged helix family two component transcriptional regulator BAC0638 Protein 2e-33 42
Dd1591_2037 YP_003004362.1 winged helix family two component transcriptional regulator BAC0308 Protein 3e-36 42
Dd1591_2037 YP_003004362.1 winged helix family two component transcriptional regulator AE000516.2.gene3505. Protein 2e-32 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_2037 YP_003004362.1 winged helix family two component transcriptional regulator VFG1390 Protein 5e-35 42
Dd1591_2037 YP_003004362.1 winged helix family two component transcriptional regulator VFG1389 Protein 7e-27 42
Dd1591_2037 YP_003004362.1 winged helix family two component transcriptional regulator VFG0596 Protein 2e-33 41
Dd1591_2037 YP_003004362.1 winged helix family two component transcriptional regulator VFG1386 Protein 6e-36 41