|
Name : Dd1591_1899 (Dd1591_1899) Accession : YP_003004228.1 Strain : Dickeya zeae Ech1591 Genome accession: NC_012912 Putative virulence/resistance : Virulence Product : type III secretion apparatus lipoprotein, YscJ/HrcJ family Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG4669 EC number : - Position : 2167465 - 2168250 bp Length : 786 bp Strand : + Note : TIGRFAM: type III secretion apparatus lipoprotein, YscJ/HrcJ family; PFAM: secretory protein YscJ/FliF family protein; KEGG: eca:ECA2095 type III secretion protein DNA sequence : ATGATGAATAAACCCGTCCTGCACCGATTCCTGACCCTGCTGCTGGCGATGTTGATCGCGGGCTGCGGTGATCGCGTGGA GCTCCATCGCGGTCTTTCTGAAAACGATGCCAACGAAGTGATTGCCGCATTAGGGGGGTATCACATCGGGGCGGAAAAGC GTACGGATAAAGCCGGCGTCAGCATTCTGATTGATGTCAAAGACATGGAACGGGCGGTCAATATTCTTAACGCCGCCGGA TTGCCGCGGCAGGCCCGCACCAATCTGGGCCAGGTGTTTCAGAAAACCGGCGTGATTTCGACACCGCTGGAAGAGCGTGC CCGCTACATTTATGCCTTGTCTCAGGAAGTGGAATCCACACTCACGCAGATTGACGGCGTGTTGGTGGCTCGGGTTCATG TTGTGTTGCCTGAGCGTATTGCACCGGGGGAACCCATTCAACCGGCATCCGCCGCGGTATTCATTAAATACCGGCCAGAG CTGGAGCCGGATAGCATCGAACCACGTATCCGCCGCATGGTGGCCAGCAGCATTCCGGGGCTTGCCGGTAAGAGCGATAA AGACCTGGCCATCGTGTTTGTTCCGGCGGAGCCCTACAAAGATCATATTCCTAAGGTGTCGCTGGGGCCGTTTCAATTGA CGCCGCAGACCATGACGCAAGTGCAATGGCTGGCCGGTTTGCTGGCGCTGGCGCTGGCGGGCGTGTTGGGCTGGCGTTTC GGCAAGCCCTGGTGGGAGCAGCAACTGGCGCGCAGGAAACAGACGCCGCCGGGTGCGGGGGCCTGA Protein sequence : MMNKPVLHRFLTLLLAMLIAGCGDRVELHRGLSENDANEVIAALGGYHIGAEKRTDKAGVSILIDVKDMERAVNILNAAG LPRQARTNLGQVFQKTGVISTPLEERARYIYALSQEVESTLTQIDGVLVARVHVVLPERIAPGEPIQPASAAVFIKYRPE LEPDSIEPRIRRMVASSIPGLAGKSDKDLAIVFVPAEPYKDHIPKVSLGPFQLTPQTMTQVQWLAGLLALALAGVLGWRF GKPWWEQQLARRKQTPPGAGA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| hrcJ | AAB49174.1 | HrcJ | Virulence | Hrp PAI | Protein | 7e-74 | 77 |
| hrcJ | ABA47308.1 | HrcJ | Virulence | S-PAI | Protein | 4e-62 | 68 |
| hrcJ | AAT96320.1 | HrcJ | Virulence | S-PAI | Protein | 4e-63 | 66 |
| hrcJ | AAT96359.1 | HrcJ | Virulence | S-PAI | Protein | 2e-62 | 66 |
| hrcJ | AAT96279.1 | HrcJ | Virulence | S-PAI | Protein | 4e-63 | 66 |
| hrcJ | AAT96157.1 | HrcJ | Virulence | T-PAI | Protein | 5e-55 | 62 |
| hrcJ | AAT96211.1 | HrcJ | Virulence | T-PAI | Protein | 5e-55 | 62 |
| hrcJ | AAC35801.1 | putative hrp type III secretion pathway protein | Virulence | Hrp PAI | Protein | 2e-56 | 61 |
| hrpC | AAB00129.1 | HrpC | Virulence | Hrp PAI | Protein | 6e-55 | 61 |
| hrcJ | NP_791211.1 | type III secretion protein HrcJ | Virulence | Hrp PAI | Protein | 8e-55 | 61 |
| hrcJ | AAB05080.1 | HrcJ | Virulence | Hrp PAI | Protein | 8e-59 | 60 |
| lscJ | AAO18027.1 | LscJ | Virulence | TTSS locus | Protein | 2e-30 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dd1591_1899 | YP_003004228.1 | type III secretion apparatus lipoprotein, YscJ/HrcJ family | VFG0218 | Protein | 9e-30 | 44 |
