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Name : Dd1591_1896 (Dd1591_1896) Accession : YP_003004225.1 Strain : Dickeya zeae Ech1591 Genome accession: NC_012912 Putative virulence/resistance : Virulence Product : sigma54 specific transcriptional regulator, Fis family Function : - COG functional category : K : Transcription COG ID : COG3829 EC number : - Position : 2165584 - 2166561 bp Length : 978 bp Strand : + Note : PFAM: sigma-54 factor interaction domain-containing protein; helix-turn-helix Fis-type; ATPase associated with various cellular activities AAA_5; SMART: AAA ATPase; KEGG: eca:ECA2090 sigma-54-dependent enhancer-binding protein DNA sequence : ATGACGTTAAGGAATAGCAATGAGTTTTCGCAGTCACTTCATTGTGCTACGCATCATTTTTTGTCAACACAGCAATCGGA GGATATACACGGCTCACTCGCTTCTCTCATCCACACTATTGCGCCTCTCAATGTCGATATCGTACTGGAGGGGGAAACCG GCACCGGAAAAGATACGCTGGCGCGCCGCATCCATCAGCTTTCCGGTTGTGCCGGTCCGCTGGTGGCGGTGAATTGCGCG GCCGTACCGGAAACGCTGGCGGAAAGCGAGTTATTCGGGGTGGTTTCCGGCGCCTATACCGGCGCCAGCCGGTCCCGTGC CGGATACCTTGAAACCGCCGATAAAGGCATCCTGTTTTTGGATGAAATCGACAGTATGCCATTGACGTTACAGGCAAAAA TGTTGAGGGTACTGGAAAGCCGCGGCATTGAGCGGTTGGGCAGTACCCAATTCAAACCGGTGGATATGCGGGTGATTGTC GCTACCCAGACGCCGTTGCAAAAGCTGGTGGACGAGGGGCGTTTTCGACGTGACCTTTACTTCCGGCTGGATACGGTAAA AATTCAATTGCCGACGCTGCGCTCACGCACGGACATCATTTTGCCGTTGTTTCAGCGCTTTTTACACGATGCCGCCGCCC GCCTGAAACTGTCGGTGCCGGGGGTGTCGGTCATCATGCAGGAGCAATTGCTGATGCACGACTGGCCGGGCAATATTCGT GAACTGAAGGCTGCCGCCGAGCGGTGGGTGCTGGGATTGTCGCCGGTGCCGATCGTCGCCGACGGAGACGGCGCAGAGAG CGACACGCCGCTGACATCGTTGAAGGTTCGGTTGCGCCGTATCGAGCGCTTTCTGATTCAGGAAGCGTTGCAGCGTAATG ACCACTGTATCGATACCGTCGTCAGTGAGCTTGGCATCCCCAAGCGCACGCTTTATCACCGCATCAAGTTGCTGAATGTC GCGGCGCGCGGGCTGTAA Protein sequence : MTLRNSNEFSQSLHCATHHFLSTQQSEDIHGSLASLIHTIAPLNVDIVLEGETGTGKDTLARRIHQLSGCAGPLVAVNCA AVPETLAESELFGVVSGAYTGASRSRAGYLETADKGILFLDEIDSMPLTLQAKMLRVLESRGIERLGSTQFKPVDMRVIV ATQTPLQKLVDEGRFRRDLYFRLDTVKIQLPTLRSRTDIILPLFQRFLHDAAARLKLSVPGVSVIMQEQLLMHDWPGNIR ELKAAAERWVLGLSPVPIVADGDGAESDTPLTSLKVRLRRIERFLIQEALQRNDHCIDTVVSELGIPKRTLYHRIKLLNV AARGL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96283.1 | HrpS/HrpR-like protein | Not tested | S-PAI | Protein | 4e-89 | 64 |
| unnamed | AAT96324.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 4e-89 | 64 |
| unnamed | AAT96363.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 2e-88 | 63 |
| hrpRS | ABA47311.1 | HrpRS | Virulence | S-PAI | Protein | 3e-89 | 62 |
| hrpS | AAD24684.1 | sigma-54-dependent enhancer-binding protein HrpS | Virulence | Hrp PAI | Protein | 9e-90 | 61 |
| hrpR | NP_791206.1 | type III transcriptional regulator HrpR | Virulence | Hrp PAI | Protein | 7e-78 | 58 |
| hrpS | AAT96161.1 | HrpS | Virulence | T-PAI | Protein | 2e-78 | 57 |
| hrpS | AAT96215.1 | HrpS | Virulence | T-PAI | Protein | 2e-78 | 57 |
| hrpR | AAC34752.1 | HrpR | Virulence | Hrp PAI | Protein | 1e-77 | 57 |
| hrpS | NP_791207.1 | type III transcriptional regulator HrpS | Virulence | Hrp PAI | Protein | 8e-78 | 56 |
| hrpS | AAC34753.1 | HrpS | Virulence | Hrp PAI | Protein | 4e-75 | 56 |
| hrpS | ABQ88367.1 | HrpS | Virulence | Hrp PAI | Protein | 4e-77 | 56 |
| hrpS | AAA17650.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 4e-77 | 56 |
| hrpR | AAT96162.1 | HrpR | Virulence | T-PAI | Protein | 7e-75 | 56 |
| hrpR | AAT96216.1 | HrpR | Virulence | T-PAI | Protein | 7e-75 | 56 |
| hrpR | AAA17651.1 | positive regulatory factor | Not tested | Hrp PAI | Protein | 7e-76 | 56 |
| hrpR | ABQ88368.1 | HrpR | Virulence | Hrp PAI | Protein | 7e-76 | 56 |
| hrpS | AAC35800.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 2e-78 | 55 |
| hrpR | AAC35799.1 | transcriptional regulator | Virulence | Hrp PAI | Protein | 3e-76 | 55 |
