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Name : pspF (Dd1591_1753) Accession : YP_003004084.1 Strain : Dickeya zeae Ech1591 Genome accession: NC_012912 Putative virulence/resistance : Virulence Product : phage shock protein operon transcriptional activator Function : - COG functional category : K : Transcription COG ID : COG1221 EC number : - Position : 2006728 - 2007720 bp Length : 993 bp Strand : - Note : transcriptional activator for pspABCE which are induced in response to phage proteins, membrane altering stresses, and impaired proton expor DNA sequence : ATGGCACACGAGAAAGAATCACTACTGGGCGAAGCCAACAGTTTTCTGGAAGTGCTGGAACAGGTCTCACAGTTGGCGCA GCTCAGCAAACCGGTACTGGTGATTGGCGAGCGGGGAACCGGCAAAGAGTTGATCGCCAGCCGCCTGCATTACCTGTCTC CCCGTTGGCAAGGGCCGTTTATTTCGCTTAACTGTGCGGCGCTGAACGAAAATTTGCTGGATTCCGAGCTGTTCGGCCAC GAAGCCGGGGCGTTTACCGGCGCACAGAAGCGCCATCTGGGGCGTTTTGAGCGCGCCGACGGCGGCACCCTGTTTCTGGA CGAACTGGCTACCGCGCCGATGCTGGTGCAGGAAAAGCTGTTGCGGGTGATCGAATACGGCGTGCTGGAGCGCGTGGGCG GCGGGCAGTCGCTGCAGGTGGATGTCCGGCTGGTGTGCGCCACCAACGAAGACTTGCCGGCGCTGGCGGCACAGGGAAAA TTCCGCGCCGACCTGCTTGACCGGCTGGCTTTCGATGTGGTGCACCTGCCGCCGCTGCGCCTGCGCCAACAAGACATCAT GCTGCTGGCGCAGCACTTCGCGGTACAGATGTGCCGGGAACTGGGCTTGCCGCTCTTTTCCGGTTTCAGCCCGCAGGCGG AACGCACCCTGCTGGATTACGGCTGGCCGGGCAATATCCGCGAGCTGAAAAACGTGGTGGAGCGTTCGCTGTATCGCCAC GGCACCACCCCTGACCCGGTCGATCACATTATTCTGAATCCGTTTAAACCACTGGCGCCGACGCAGACCCACGCCGCTCA GCCCCCCTCCGGCGCCGTACCCACCCTACCGTTGAACTTGCGTGACTGGCAACACCGTCAGGAGCGGCAACTGGTAGAAC AGGCGCTCGCTCAGGCACAGTTCAACCAACGTAAAGCCGCCGGGTTGCTGGCGCTCACCTACCATCAGTTTCGCGGTCTG TTAAAAAAACACGAGATTGGCGCCAATGAATAA Protein sequence : MAHEKESLLGEANSFLEVLEQVSQLAQLSKPVLVIGERGTGKELIASRLHYLSPRWQGPFISLNCAALNENLLDSELFGH EAGAFTGAQKRHLGRFERADGGTLFLDELATAPMLVQEKLLRVIEYGVLERVGGGQSLQVDVRLVCATNEDLPALAAQGK FRADLLDRLAFDVVHLPPLRLRQQDIMLLAQHFAVQMCRELGLPLFSGFSPQAERTLLDYGWPGNIRELKNVVERSLYRH GTTPDPVDHIILNPFKPLAPTQTHAAQPPSGAVPTLPLNLRDWQHRQERQLVEQALAQAQFNQRKAAGLLALTYHQFRGL LKKHEIGANE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| unnamed | AAT96283.1 | HrpS/HrpR-like protein | Not tested | S-PAI | Protein | 1e-33 | 42 |
| unnamed | AAT96324.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 1e-33 | 42 |
| unnamed | AAT96363.1 | HrpS/HrpR-like protein | Virulence | S-PAI | Protein | 1e-33 | 42 |
| hrpRS | ABA47311.1 | HrpRS | Virulence | S-PAI | Protein | 9e-33 | 41 |
