Gene Information

Name : Dd1591_1496 (Dd1591_1496)
Accession : YP_003003833.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Virulence
Product : phage transcriptional regulator AlpA
Function : -
COG functional category : K : Transcription
COG ID : COG3311
EC number : -
Position : 1715253 - 1715447 bp
Length : 195 bp
Strand : -
Note : PFAM: Prophage CP4-57 regulatory; KEGG: eca:ECA1627 putative prophage regulatory protein

DNA sequence :
ATGACATCGCATCAGTTACTGCGTTTGAGACAAGTGGAAGAAAAAACTGGCCTGAAGCGCTCGCAAATCTATCTGTATAT
GAAGTACGGAACCTTTCCGGCCTCAATAAAGATTGGTCCCGCCAGTGTGGCCTGGCTCGAATCTGAAATTGACGAGTGGA
TTAACCTCAAATTAGCCAACCGCTTGACGCGCTGA

Protein sequence :
MTSHQLLRLRQVEEKTGLKRSQIYLYMKYGTFPASIKIGPASVAWLESEIDEWINLKLANRLTR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
PMI2608 YP_002152324.1 prophage regulatory protein Not tested Not named Protein 5e-20 91
unnamed CAA21398.1 - Not tested HPI Protein 2e-19 87
unnamed CAB46594.1 DNA-binding protein Not tested HPI Protein 1e-19 87
VC0497 NP_230151.1 transcriptional regulator Not tested VSP-2 Protein 9e-08 49
VC0395_A1382 YP_001217325.1 transcriptional regulator Not tested VPI-2 Protein 4e-09 48
VPI2_0033 AAX20900.1 transcriptional regulator Not tested VPI-2 Protein 3e-09 48
VC1785 NP_231420.1 transcriptional regulator Not tested VPI-2 Protein 4e-09 48
ORF SG104 AAN62325.1 phage-related protein Not tested PAGI-3(SG) Protein 5e-10 46
ORF C109 AAN62202.1 phage-related protein Not tested PAGI-2(C) Protein 2e-09 42
VPI2_0041 ACA01856.1 predicted transcriptional regulator Not tested VPI-2 Protein 5e-09 41
VC1809 NP_231443.1 transcriptional regulator Not tested VPI-2 Protein 8e-09 41
VC0395_A1406 YP_001217349.1 transcriptional regulator Not tested VPI-2 Protein 8e-09 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_1496 YP_003003833.1 phage transcriptional regulator AlpA VFG1118 Protein 1e-09 48
Dd1591_1496 YP_003003833.1 phage transcriptional regulator AlpA VFG1141 Protein 2e-09 41