Gene Information

Name : Dd1591_1489 (Dd1591_1489)
Accession : YP_003003826.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Resistance
Product : Lytic transglycosylase catalytic
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1708093 - 1708740 bp
Length : 648 bp
Strand : -
Note : PFAM: Lytic transglycosylase catalytic; KEGG: eca:ECA1622 putative conjugal transfer protein

DNA sequence : 
ATGCTTTCCCCGACAGCTTTTCTGGCGGCGGCGATGCAGTGTGCCGCCAGCATTCACCCGTCCACCGCATTTGATGTGGC
AAAGGTGGAATCCGGCTTTAATCCTTACGCCATCGCTGAAATCGTGCCAAAGCAAGAGAGAATGCCCGGCAGCGCAGGTG
TTATTTCCCACCAGCCCACCCGCGATGAAACAGCCGTCAGTATCATCAACCGGATAGAGGCCAAAGGCCGCCGCTATTCG
GTCGGGCTGATGCAAATCACCAGTACCCATTTTCAGCATTACGGCGTGACGGCACGGGCGTTGTTAGACCCGTGTACCAA
TCTGTCTGTTTTTGAGCGCATCCTTACCGACTGCTATCAGCGCGGCGGCACGCTGCAACGCGCACTCAGTTGCTACTACG
CCGGTAATTTCACTGCCGGTCAACAACCGGAATCCACCTTCAACCAGACCAGCTATCTCCAGCGTATTGGCTATGCCGTC
CCGTCAACGCAGGAAGACCGCACGCGTAGAACCAACAGCCAGGCCACGTCAGCGATGCATTATCCGGCCACCGTGCTGCG
CGGTGAGCTTGCCGCCCCCTCTACCCCGGTTTCGACCACCCTGCGCTACCCCAACGCCGTCCTTCGCGGCGATGTATCCC
CCCTGTGA

Protein sequence : 
MLSPTAFLAAAMQCAASIHPSTAFDVAKVESGFNPYAIAEIVPKQERMPGSAGVISHQPTRDETAVSIINRIEAKGRRYS
VGLMQITSTHFQHYGVTARALLDPCTNLSVFERILTDCYQRGGTLQRALSCYYAGNFTAGQQPESTFNQTSYLQRIGYAV
PSTQEDRTRRTNSQATSAMHYPATVLRGELAAPSTPVSTTLRYPNAVLRGDVSPL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70283.1 Pilx1/VirB1-like protein Not tested HPI Protein 2e-56 64

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_1489 YP_003003826.1 Lytic transglycosylase catalytic BAC0396 Protein 4e-43 46