Gene Information

Name : Dd1591_1487 (Dd1591_1487)
Accession : YP_003003824.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Resistance
Product : CagE TrbE VirB component of type IV transporter system
Function : -
COG functional category : U : Intracellular trafficking, secretion and vesicular transport
COG ID : COG3451
EC number : -
Position : 1705041 - 1707788 bp
Length : 2748 bp
Strand : -
Note : PFAM: CagE TrbE VirB component of type IV transporter system; type IV secretory pathway VirB3 family protein; KEGG: eca:ECA1620 putative conjugal transfer protein

DNA sequence :
ATGACCACCCTGAATAAAGCGCTCACCCGGCCCGCCGCCATTATGGGCATCCCCATCGTCCCATTCGTTCTCGTCAGCGG
GGCCATCGTCCTGCTGTCGGTCTATGTCAGCTATTACCTGACGCTATTACTGATCCCGGCCTGGCTGGAAATGCGGGCGA
AGGCCCGAGCCGATATCCATTATTTCGGGTTGTTATGGCTGGCGTTTAAAACCCGTGGCCGGTTTGGCACGAACCGGCAT
TTTGGCGCGACGGCGATGCTGGCAAACCAGTATGACGCCGTCGATATTTCGGAGTTTACCGACAAGATGAAATTAAACGC
GCGCATCACGCTGGATAAATACATCCCCTACTCTTCCCACCTTCACCCGCACGTCATCAGAAACCGCCACGGTGATTTCG
TCGCCTCCTGGGAGCTGGGCGGCACCCTGTTTGAATGTGAGGATGAACATCATCTGACGCTGATGACAAGCCATCTCAAC
AACCTGATCCGCGCCTATGAAGGGCTGCCGGTCACGTTCTATATTCACCGAATACGGGAGACCTATCAGGATGCCTTTGA
GGCGACCTCGGGTATTCCGTTTTCCGACGAAGTCGCGGCACGCTATTACCGGGCACTCAACGCGAAGCCGCTCTGGCGGC
ATCGGCTGTTTTTCACCGTCTGTTATGCGCCCTTCTCCGCACTGGAGAAAAAGGCCATGAAGACACAGCCCGCCGGAAAA
AGGCAGGCGGCGCTGGATGAAGCGCTGAAGGTCATGCTGGAGTACCATGCCGCACTCGGCAGCGCACTGTCACGCTATAT
GGCGACCCCTCTGGGAACCTATGAGGAGAAAGGACGGGTCTACTCCTCGCAACTGGCGTTCTACCATCGCCTGATCACCG
GCCAATGGCAGCCGGTGGCGGTGACACGCTCACCGTTTTACCTCACGCTCAGTACACCGGATGTGTTTTTTACCACCGAT
ACCGCCGAATGCCAGACCGTCGGCGGCTCCCGGTTCTTCCGCAGTCTGGAAATTAAGGACTATTCACCGGAGACCGCGAC
CGGCCTGCTGGATGCGCTGTTGTATGCCGAAAGCGAGTACGTACTGACGCAGTCTTTCACCTGCATGGCACGGGATGAGG
CACAACACCATATCCGGCTGGCGGAAAAACGGCTGAATGCAACCGACGATGACGCACTGTCACAGCGTGAAGAGCTGGTT
GTCTTGCGCGATCTGCTCCAGTCCGGGCATGTGTCCTGCGGCAAATACCATTTTTCCCTGCTGGTGTCCTCGGCCAGTGC
CGATCAGGTGGTCAGGGAGACCCACGCGCTGGCCCAGCCGTTTACCGACCTCGGTATCATGACCTCGCTGTCCACGCTGT
CGTTACCTGCCGCCTATCTGGCTCAACTGCCCGGCATGTATCCCTTTCGCCCCCGGCTGGTGGTCGTCAGCAGCCAGAAC
TACGCGGATCTGGGTAGCCTGCATAACTTTCACCCTCACAAGCGCAGCGGCAATCCGTGGGGCGACGCCATCGCCATTCT
GACATCGCCCGGCGGCGGAGGTTATTACCTGAACCTGCACGACAGCCAGGTCGGGCGGGATGACTTCAACGAGAAAACAC
CGGGGAATACCGCCATCATCGGCAAAACCGGCTCAGGGAAGACCCTGCTGATGACGATGATGCAACACCTGATGCAGAAG
TACCGCCACCCGGCGACATTTTCCGCTGCGGCCCCCGGTAAACGGCTGACTACCGTTTACTTTGATAAAGACCGGGCCGC
CGAGATGTCGATCCGCCAGATGGGCGGGCGTTACTTTCGCATCCGCACCGGTACGCCTGCCGGGTTCAACCCGTTCTCCC
TTGCACCAACCCGACGCAACATCAGCTTTATCAAGCAATTGGTCCGCATGTTGTGCCGTCGCAACGGCAAACCGCTCGAC
CCACGCGATGAAGCGCGCATCAGCGCCGCCGTGGATACCCTGATGCAGGACTACCCGCCGGAATTGCGCCGTTATGGCAT
TACCCGGCTGCTGGAGGTGTTGCCCGAGCCGCCGACCCGCGAGGCCAGAACCAACGGGCTGCGCATCCGTCTGAAACAGT
GGGCGCAGGGCGGCGAATTCGGCTGGATTTTCGATAACGCGGAAGACAGCTTTAACATCGGCGAGAGCGATAACATCGGC
ATCGATGGAACAGAATTTCTGGATGACGACGACATTCGCGGCCCGATCACCTTTTACCTGCTGTTCCGCGTCACCAGCCT
GCTGGACGGTCGCCGGTTGGTGATGTTCATGGATGAATTCTGGAAATGGCTGGCTGATGTCGAGTTTTCCAGATTCTCCC
TCAATATGCTCAAGGTGATCCGCAAACTGAACGGCATTTTTATCCCCGCCACCCAGTCCCCCGATGAAATTGTCAGGCAC
CCCATCGCGCCCGCGATTATTGAACAGTGCAGCACACAGATCTTTCTCGCCAATCCCAAAGCCAGCCGGGCGGATTACGT
AGAGAAAATGAACGTCCCCGACAGCGTGTATGACACCGTTCGTCGTCTGGACCCGGGAGAGCATTATATGGTCATCATGA
AAACACCGCTGCGCGCCGGTGAAACCCGGCCCTTTGTCGCCCTGGCAAGAATGGATTTATCGGGCATCGGCAATCTCACC
ACAATCCTGAGCGGAAGCGAAGACAACCTGAAACGGTTTGATGCGCTTTATCAGGAGGGCATGTCCCCTCAGGACTGGAA
AGCGGCCTTCCTTGAACAGGCCATCTGA

Protein sequence :
MTTLNKALTRPAAIMGIPIVPFVLVSGAIVLLSVYVSYYLTLLLIPAWLEMRAKARADIHYFGLLWLAFKTRGRFGTNRH
FGATAMLANQYDAVDISEFTDKMKLNARITLDKYIPYSSHLHPHVIRNRHGDFVASWELGGTLFECEDEHHLTLMTSHLN
NLIRAYEGLPVTFYIHRIRETYQDAFEATSGIPFSDEVAARYYRALNAKPLWRHRLFFTVCYAPFSALEKKAMKTQPAGK
RQAALDEALKVMLEYHAALGSALSRYMATPLGTYEEKGRVYSSQLAFYHRLITGQWQPVAVTRSPFYLTLSTPDVFFTTD
TAECQTVGGSRFFRSLEIKDYSPETATGLLDALLYAESEYVLTQSFTCMARDEAQHHIRLAEKRLNATDDDALSQREELV
VLRDLLQSGHVSCGKYHFSLLVSSASADQVVRETHALAQPFTDLGIMTSLSTLSLPAAYLAQLPGMYPFRPRLVVVSSQN
YADLGSLHNFHPHKRSGNPWGDAIAILTSPGGGGYYLNLHDSQVGRDDFNEKTPGNTAIIGKTGSGKTLLMTMMQHLMQK
YRHPATFSAAAPGKRLTTVYFDKDRAAEMSIRQMGGRYFRIRTGTPAGFNPFSLAPTRRNISFIKQLVRMLCRRNGKPLD
PRDEARISAAVDTLMQDYPPELRRYGITRLLEVLPEPPTREARTNGLRIRLKQWAQGGEFGWIFDNAEDSFNIGESDNIG
IDGTEFLDDDDIRGPITFYLLFRVTSLLDGRRLVMFMDEFWKWLADVEFSRFSLNMLKVIRKLNGIFIPATQSPDEIVRH
PIAPAIIEQCSTQIFLANPKASRADYVEKMNVPDSVYDTVRRLDPGEHYMVIMKTPLRAGETRPFVALARMDLSGIGNLT
TILSGSEDNLKRFDALYQEGMSPQDWKAAFLEQAI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
unnamed AAP70302.1 Pilx3-4/VirB3-4-like protein Not tested HPI Protein 0.0 51

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
Dd1591_1487 YP_003003824.1 CagE TrbE VirB component of type IV transporter system BAC0398 Protein 0.0 54