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Name : Dd1591_1301 (Dd1591_1301) Accession : YP_003003643.1 Strain : Dickeya zeae Ech1591 Genome accession: NC_012912 Putative virulence/resistance : Virulence Product : general secretion pathway protein F Function : - COG functional category : N : Cell motility COG ID : COG1459 EC number : - Position : 1477805 - 1479031 bp Length : 1227 bp Strand : + Note : TIGRFAM: general secretion pathway protein F; PFAM: type II secretion system protein; KEGG: eca:ECA3107 general secretion pathway protein F DNA sequence : ATGGCGCTGTTCCAGTATCAGGCATTAAATGCCCAGGGAAAAAAAAGTCAGGGTATGCAGGAAGCGGATTCAGCCCGTCA CGCGCGTCAACTGCTGCGTGAAAAAGGGTTGGTGCCGGTCAAAATCGAGGAACAGCGCGGTGAGGCGTCTCCCCGCAGTG GATTTTCTCTGTCATTCGGCCGTTCGCATCGTATCAGCGCCAGCGATCTGGCGTTGTTGACTCGTCAACTGGCGACGTTG GTGGCGGCGGCTCTGCCGCTGGAGGAAGCGCTGGACGCGGTGGCTAAGCAAAGCGAAAAACCGAAGCTGAGCGCGCTGAT GGCGGCGGTACGCGCCAAGGTCGTGGAAGGGCATTCGCTGGCCGAGGCAATGGGGAATTTTCCCGGCAGTTTTGAGCGTT TGTATTGTGCGATGGTCGCAGCGGGCGAAGCATCCGGTCATTTGGATGCCGTGCTGAACCGATTGGCGGATTACACCGAA CAGCGCCAGCAGATGCGCAGTCGGATTCAGCAGGCGATGATTTATCCCTGCGTGTTGACCTTGGTGGCGATTTCGGTGGT ATCGATTTTGTTGTCTGCCGTCGTGCCAAAGGTCGTCGAACAGTTTATTCACATGAAGCAAGCGCTGCCGTTATCCACCC GTTTACTGATGAGCGCCAGCGATGCAGTGAGAACCTACGGGCCCTGGGTGGTTCTGTTACTGGTGCTGGCGATCATGGGA TTTCGCGTATTACTGCGCCAGGAAAAACACCGCCTCGTTTTTCATCGCCGTTTATTGTTCCTTCCCGTCATCGGGCGTAT TGCCCGTGGCCTGAATACAGCCCGCTATGCCCGCACCCTGAGCATCCTTAACTCCAGCGCCGTGCCGCTATTACAGGCGA TGCGTATCAGTGGCGATGTACTGACCAACGATTATGCCCGTTTTCGGCTGGGGCAGGCGACCGATGCCGTGCGTGAAGGC GTGAGCCTGCACAAGGCGCTGGAGCAAACCGCGCTGTTCCCGCCGATGATGCGCCACATGATCGCCAGCGGCGAGCGCAG TGGCGAGCTCGACGGCATGTTAACCCGCGCGGCGGATAATCAGGATCGTGAATTCAGCGCTCAAATGACGCTGGCGCTGG GATTGTTCGAACCCCTGCTGGTGGTGAGCATGGCCGGCATTGTGCTGTTTATCGTGCTGGCGATTCTCCAGCCGATTCTG CAGTTGAATACCCTAATGAGTATGTAG Protein sequence : MALFQYQALNAQGKKSQGMQEADSARHARQLLREKGLVPVKIEEQRGEASPRSGFSLSFGRSHRISASDLALLTRQLATL VAAALPLEEALDAVAKQSEKPKLSALMAAVRAKVVEGHSLAEAMGNFPGSFERLYCAMVAAGEASGHLDAVLNRLADYTE QRQQMRSRIQQAMIYPCVLTLVAISVVSILLSAVVPKVVEQFIHMKQALPLSTRLLMSASDAVRTYGPWVVLLLVLAIMG FRVLLRQEKHRLVFHRRLLFLPVIGRIARGLNTARYARTLSILNSSAVPLLQAMRISGDVLTNDYARFRLGQATDAVREG VSLHKALEQTALFPPMMRHMIASGERSGELDGMLTRAADNQDREFSAQMTLALGLFEPLLVVSMAGIVLFIVLAILQPIL QLNTLMSM |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspF | CAE85232.1 | GspF, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 2e-77 | 57 |
| gspF | YP_854405.1 | type II secretion protein GspF | Not tested | PAI I APEC-O1 | Protein | 2e-78 | 57 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dd1591_1301 | YP_003003643.1 | general secretion pathway protein F | VFG2049 | Protein | 7e-76 | 57 |
| Dd1591_1301 | YP_003003643.1 | general secretion pathway protein F | VFG0181 | Protein | 1e-75 | 52 |
| Dd1591_1301 | YP_003003643.1 | general secretion pathway protein F | VFG1870 | Protein | 5e-62 | 43 |
