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Name : Dd1591_1300 (Dd1591_1300) Accession : YP_003003642.1 Strain : Dickeya zeae Ech1591 Genome accession: NC_012912 Putative virulence/resistance : Virulence Product : general secretory pathway protein E Function : - COG functional category : N : Cell motility COG ID : COG2804 EC number : - Position : 1476307 - 1477803 bp Length : 1497 bp Strand : + Note : KEGG: eca:ECA3108 general secretion pathway protein E; TIGRFAM: general secretory pathway protein E; PFAM: type II secretion system protein E; SMART: AAA ATPase DNA sequence : ATGAGCGATCAGCCCGTTCACATATCCGAGCTGAGGCCGGTACTGCCGTTTGCGTTTGCCCGGGCTCAGCAAATTCTGCT GTTGCAGGATGAGTCGGCCTCGGCGGCGGAGGTGGTTTGTGTCCCTGAGACGCCTGCGCTGGCGTTACTGGAAGTACGTC GGGTTGCTGGGGTGGCGTTGACGGTGAGCCAGGTCAGTCCGGAGGAATTTGAACGGCAATTGGTGATGCGCTATCAGCGC GACTCCGAAGAGGCGCGTCGCCTGATGGAAGATATCGGTAACGATATCGATTTCTATACGCTGGCGGAAGAGCTGCCGGA TAGCGACGATTTGCTGGATGGCGAAGATGACGCGCCGATTATTCGGTTGATCAACGCCATGCTTACCGAAGCCATCAAAC ACAAGGCTTCGGATATTCATATCGAAACGTTTGAGCGCCATTTGCTGATTCGCTTCCGCATTGATGGCGTGTTGCGGGAA ATCTTGCGCCCGCAGCGTCAACTGGCGTCTTTGTTGGTATCCCGTATCAAGGTGATGGCCAAGCTGGATATCGCCGAAAA GCGTGTCCCACAGGATGGCCGTATGGCGCTGCGTATCGGCGGACGGGCGATTGACGTGCGTGTTTCGACCCTGCCGTCCA ACTATGGCGAACGCGTCGTATTGCGTCTGCTCGATAAAAACAGCGTCCGGCTCGATCTGGAAACACTGGGGATGGCCGAG CACCATCGACGGCAGTTGGACACGCTGATCCACCGTCCGCACGGCATTATTCTGGTGACCGGCCCGACGGGGTCGGGGAA AAGTACCACCCTGTATGCGGCATTGAGCCGCCTCAATTCTGCCGAACGCAACATCATGACGGTGGAAGATCCGATTGAAT ACGAGCTGGAAGGCATCGGGCAGACCCAGGTTAACCCTAAAGTCGATATGACATTCGCGCGTGGTTTGCGTGCAATCCTG CGTCAGGACCCGGACGTGGTGCTGGTGGGGGAAATTCGTGACGGCGAAACGGCGCAAATTGCGGTACAGGCATCGTTGAC CGGCCATCTGGTGTTATCCACGTTGCATACCAATAGCGCGTTGGGCGCATTGTCCCGTCTTCAGGATATGGGCATCGAGC CGTTCCTGCTGTCTACATCGTTGCTGGGGGTGTTGGCGCAGCGGCTGGTGCGTACGCTGTGTCCGTCATGTCGCCAGCCT TACACCATCGATCACGAACAGGCGGAGCAAACCGGCCTGGCGGTGGGCACTACGCTCTACCATCCCGGCGGTTGTGATAA GTGTAATTACAGCGGCTATCGTGGCCGTACCGGCATTCATGAATTACTGCTGATCGATGATACGGTGCGCACCGCTATTC ATCGTGGCGAAAGTGAACTGGGTATCGCCAGGATGCTGGGCGATAACCGGGTCACCATTCGTCAGGATGGGCTGGACAAG GTTCTGGCGGGCATCACCACCTGGGAAGAGGTGGTGCGTGTAACGAAAGAGGAATGA Protein sequence : MSDQPVHISELRPVLPFAFARAQQILLLQDESASAAEVVCVPETPALALLEVRRVAGVALTVSQVSPEEFERQLVMRYQR DSEEARRLMEDIGNDIDFYTLAEELPDSDDLLDGEDDAPIIRLINAMLTEAIKHKASDIHIETFERHLLIRFRIDGVLRE ILRPQRQLASLLVSRIKVMAKLDIAEKRVPQDGRMALRIGGRAIDVRVSTLPSNYGERVVLRLLDKNSVRLDLETLGMAE HHRRQLDTLIHRPHGIILVTGPTGSGKSTTLYAALSRLNSAERNIMTVEDPIEYELEGIGQTQVNPKVDMTFARGLRAIL RQDPDVVLVGEIRDGETAQIAVQASLTGHLVLSTLHTNSALGALSRLQDMGIEPFLLSTSLLGVLAQRLVRTLCPSCRQP YTIDHEQAEQTGLAVGTTLYHPGGCDKCNYSGYRGRTGIHELLLIDDTVRTAIHRGESELGIARMLGDNRVTIRQDGLDK VLAGITTWEEVVRVTKEE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| gspE | YP_854406.1 | type II secretion protein GspE | Not tested | PAI I APEC-O1 | Protein | 1e-136 | 64 |
| gspE | CAE85233.1 | GspE, hypothetical type II secretion protein | Not tested | PAI V 536 | Protein | 1e-136 | 64 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| Dd1591_1300 | YP_003003642.1 | general secretory pathway protein E | VFG2048 | Protein | 4e-137 | 63 |
| Dd1591_1300 | YP_003003642.1 | general secretory pathway protein E | VFG0182 | Protein | 1e-134 | 61 |
| Dd1591_1300 | YP_003003642.1 | general secretory pathway protein E | VFG1876 | Protein | 4e-125 | 57 |
| Dd1591_1300 | YP_003003642.1 | general secretory pathway protein E | VFG2426 | Protein | 1e-75 | 47 |
| Dd1591_1300 | YP_003003642.1 | general secretory pathway protein E | VFG0233 | Protein | 1e-83 | 46 |
