Gene Information

Name : Dd1591_1163 (Dd1591_1163)
Accession : YP_003003509.1
Strain : Dickeya zeae Ech1591
Genome accession: NC_012912
Putative virulence/resistance : Unknown
Product : Hcp1 family type VI secretion system effector
Function : -
COG functional category : S : Function unknown
COG ID : COG3157
EC number : -
Position : 1329170 - 1329688 bp
Length : 519 bp
Strand : -
Note : TIGRFAM: type VI secretion system effector, Hcp1 family; PFAM: protein of unknown function DUF796; KEGG: eca:ECA2866 hypothetical protein

DNA sequence :
ATGCCAACTCCATGCTATATCAGCATCGAAGGTAAAACGCAGGGCAACATCACCGCCGGTGCCTTCACCTCCGACTCCGT
CGGCAACATCTACGTGCAGGGTCACGAAGACGAGATGCTGGTGCAGGAATTCAAACACATCGTCACCGTCCCGACCGACC
CGCAGTCCGGCCAGCCTGCCGGTCAGCGCGTGCACAAACCGTTCAAGTTCACCGTTGCGCTGAACAAAGCCGTCCCGCTG
CTGTATAACGCGCTGGCCTCCGGCGAAATGCTGCCGACCGTGACCCTGAAATGGTATCGCACCTCTGTCGAAGGCAAGCA
GGAGCATTTCTTCACCACCACCCTGACCGATGCCACCATCGTCGACATCAACAACCAGATGCCGCACTGCCAGGACCCGT
CCAAGCAGGACTACACCCAGCTGATTGAAGTGTCACTGGCCTACCGCAAGGTGGACTGGGAGCACACCGTGGCCGGGACT
TCCGGCTCTGACGACTGGCGCGCGCCGATCGAAGCGTAA

Protein sequence :
MPTPCYISIEGKTQGNITAGAFTSDSVGNIYVQGHEDEMLVQEFKHIVTVPTDPQSGQPAGQRVHKPFKFTVALNKAVPL
LYNALASGEMLPTVTLKWYRTSVEGKQEHFFTTTLTDATIVDINNQMPHCQDPSKQDYTQLIEVSLAYRKVDWEHTVAGT
SGSDDWRAPIEA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
aec16 YP_851428.1 hypothetical protein Not tested PAI II APEC-O1 Protein 3e-67 83
aec16 AAQ96710.1 Aec16 Not tested AGI-1 Protein 2e-67 83
HH0243 NP_859774.1 hypothetical protein Not tested HHGI1 Protein 8e-49 63