Gene Information

Name : ybgP (B21_00666)
Accession : YP_002998510.2
Strain : Escherichia coli BL21(DE3)
Genome accession: NC_012892
Putative virulence/resistance : Virulence
Product : ybgP
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 707537 - 708268 bp
Length : 732 bp
Strand : -
Note : -

DNA sequence : 
ATGACATTTATGAAAGGACTACCCCTTTTGTTGTTGGTTGCCAGTCTGTGCAGCCACGCTGCACTACAACCCGATCGCAC
TCGTATTGTGTTTAACGCTAATGATAAAGCTACCAGTCTGCGCGTGGATAATCGTAGCGATAAACTCCCCTACCTCGCTT
ATTCCTGGCTCGAAAATGAAAAAGGGGAGAAAAGCGATGATCTTCTGGTTGCCCTGCCACCGATACAACGTCTGGAACCG
AAAGCAACAACGCAGGTGCGGATAGTAAAGCAAGCCTCGACCGCGAAATTACCGGGCGATCGCGAAACGCTATTTTTCTA
CAATATGCGTGAAATTCCTCCCGCCCCGGAAAAAAACAGCGACCATGCCGTTCTGCAAGTCGCCATTCAGAGTCGTATCA
AGGTGTTCTGGCGACCGGCTGCATTACGCAAGAAAGCAGGAGAAAAGGTCGAACTGCAGTTACAGGTTAGCCAGCAGGGC
AACCAACTGACACTGAAAAATCCTACCGCGTATTATCTGACCATTGCCTATCTGGGGAGAAATGAAAAAGGCGTTTTCCC
CGGCTTCAAAACCGTGATGATTGCGCCTTTTAGTACGGTCAACACAAACACCGGAAGTTATAGCGGCAGCCAGTTTTATC
TCGGTTATATGGATGATTACGGCGCGTTACGCATGACGACGCTCAACTGCAGCGGAGAATGCCGTTTACAAGCCGTGGAG
GCGAAGAAATGA

Protein sequence : 
MTFMKGLPLLLLVASLCSHAALQPDRTRIVFNANDKATSLRVDNRSDKLPYLAYSWLENEKGEKSDDLLVALPPIQRLEP
KATTQVRIVKQASTAKLPGDRETLFFYNMREIPPAPEKNSDHAVLQVAIQSRIKVFWRPAALRKKAGEKVELQLQVSQQG
NQLTLKNPTAYYLTIAYLGRNEKGVFPGFKTVMIAPFSTVNTNTGSYSGSQFYLGYMDDYGALRMTTLNCSGECRLQAVE
AKK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
prfD CAD42028.1 PrfD protein Virulence PAI II 536 Protein 1e-37 42
papD_2 NP_757033.1 PapD protein Virulence PAI II CFT073 Protein 3e-37 42
papD YP_002414014.1 Chaperone protein PapD Not tested Not named Protein 3e-37 42
papD AAZ04423.1 P pilus chaperone Virulence PAI I APEC-O1 Protein 2e-37 42
papD AAL67413.1 PapD Virulence PAI II CFT073 Protein 2e-37 42
papD YP_854253.1 pilus assembly protein chaperone PapD Virulence PAI I APEC-O1 Protein 3e-37 42
papD NP_755464.1 PapD protein Virulence PAI I CFT073 Protein 8e-33 41

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ybgP YP_002998510.2 ybgP VFG1547 Protein 8e-38 42
ybgP YP_002998510.2 ybgP VFG0896 Protein 1e-37 42
ybgP YP_002998510.2 ybgP VFG0885 Protein 3e-33 41